| 2025 | ICLR | Identifying latent state transitions in non-linear dynamical systems. | aglar Hizli, agatay Yildiz, Matthias Bethge, S. T. John, Pekka Marttinen |
| 2025 | MICCAI | New Multimodal Similarity Measure for Image Registration via Modeling Local Functional Dependence with Linear Combination of Learned Basis Functions. | Joel Honkamaa, Pekka Marttinen |
| 2025 | MICCAI | Strategies for Robust Deep Learning Based Deformable Registration. | Joel Honkamaa, Pekka Marttinen |
| 2024 | ACL | In-Context Symbolic Regression: Leveraging Large Language Models for Function Discovery. | Matteo Merler, Katsiaryna Haitsiukevich, Nicola Dainese, Pekka Marttinen |
| 2024 | COLING | Knowledge-augmented Graph Neural Networks with Concept-aware Attention for Adverse Drug Event Detection. | Ya Gao, Shaoxiong Ji, Pekka Marttinen |
| 2024 | EACL | Can docstring reformulation with an LLM improve code generation? | Nicola Dainese, Alexander Ilin, Pekka Marttinen |
| 2024 | ECCV | Improving Medical Multi-modal Contrastive Learning with Expert Annotations. | Yogesh Kumar, Pekka Marttinen |
| 2024 | EMNLP | Generating Demonstrations for In-Context Compositional Generalization in Grounded Language Learning. | Sam Spilsbury, Pekka Marttinen, Alexander Ilin |
| 2024 | IUI | VMS: Interactive Visualization to Support the Sensemaking and Selection of Predictive Models. | Chen He, Vishnu Raj, Hans Moen, Tommi Grhn, Chen Wang, Laura-Maria Peltonen, Saila Koivusalo, Pekka Marttinen, Giulio Jacucci |
| 2023 | AISTATS | Incorporating functional summary information in Bayesian neural networks using a Dirichlet process likelihood approach. | Vishnu Raj, Tianyu Cui, Markus Heinonen, Pekka Marttinen |
| 2023 | EACL | Patient Outcome and Zero-shot Diagnosis Prediction with Hypernetwork-guided Multitask Learning. | Shaoxiong Ji, Pekka Marttinen |
| 2023 | EMNLP | Reader: Model-based language-instructed reinforcement learning. | Nicola Dainese, Pekka Marttinen, Alexander Ilin |
| 2023 | ICML | Causal Modeling of Policy Interventions From Treatment-Outcome Sequences. | Caglar Hizli, S. T. John, Anne Tuulikki Juuti, Tuure Tapani Saarinen, Kirsi Hannele Pietilinen, Pekka Marttinen |
| 2021 | ACL | Medical Code Assignment with Gated Convolution and Note-Code Interaction. | Shaoxiong Ji, Shirui Pan, Pekka Marttinen |
| 2020 | ECAI | Learning Global Pairwise Interactions with Bayesian Neural Networks. | Tianyu Cui, Pekka Marttinen, Samuel Kaski |
| 2020 | UAI | Batch simulations and uncertainty quantification in Gaussian process surrogate approximate Bayesian computation. | Marko Jrvenp, Aki Vehtari, Pekka Marttinen |
| 2017 | IUI | Interactive Elicitation of Knowledge on Feature Relevance Improves Predictions in Small Data Sets. | Luana Micallef, Iiris Sundin, Pekka Marttinen, Muhammad Ammad-ud-din, Tomi Peltola, Marta Soare, Giulio Jacucci, Samuel Kaski |