| 2022 | AMIA | Medication-Wide Association Study Plus (MWAS+): A New Approach to Drug Repurposing. | Yan Cheng, Ali Ahmed, Edward Zamrini, Yijun Shao, Qing Zeng-Treitler |
| 2022 | AMIA | A Novel Hybrid Value-Aware Transformer Architecture for Learning from Longitudinal Clinical Data. | Yijun Shao, Yan Cheng, Stuart J. Nelson, Peter Kokkinos, Edward Zamrini, Ali Ahmed, Qing Zeng-Treitler |
| 2021 | AMIA | Enhancing Clinical Data Analysis by Explaining Interaction Effects Between Covariates in Deep Neural Network Models. | Yijun Shao, Ali Ahmed, Edward Zamrini, Yan Cheng, Qing Zeng-Treitler |
| 2017 | AMIA | Physician Conception of Patient Frailty in Cardiac Care Decisions. | Kristina Doing-Harris, Rashmee U. Shah, YiJun Shao, Bruce E. Bray, Qing Zeng-Treitler, Jennifer H. Garvin, Charlene R. Weir |
| 2016 | AMIA | Identification and Use of Frailty Indicators from Text to Examine Associations with Clinical Outcomes Among Patients with Heart Failure. | YiJun Shao, April F. Mohanty, Ali Ahmed, Charlene R. Weir, Bruce E. Bray, Rashmee U. Shah, Douglas Redd, Qing Zeng-Treitler |
| 2015 | AMIA | Representation of Functional Status Concepts from Clinical Documents and Social Media Sources by Standard Terminologies. | Jinqiu Kuang, April F. Mohanty, Rashmi V. H., Charlene R. Weir, Bruce E. Bray, Qing Zeng-Treitler |
| 2012 | AMIA | Automated Illustration of Patients Instructions. | Duy Duc An Bui, Carlos Nakamura, Bruce E. Bray, Qing Zeng-Treitler |
| 2012 | AMIA | Not So Familiar Quotations: Content of Quoted Strings in Clinic Notes. | Brent Hill, Qing Zeng-Treitler, Doug Redd |
| 2009 | AMIA | Tailoring Vocabularies for NLP in Sub-Domains: A Method to Detect Unused Word Sense. | Rosa L. Figueroa, Qing Zeng-Treitler, Sergey Goryachev, Eduardo P. Wiechmann |
| 2008 | AMIA | Identification and Extraction of Family History Information from Clinical Reports. | Sergey Goryachev, Hyeoneui Kim, Qing Zeng-Treitler |
| 2008 | AMIA | Creating a Gold Standard for the Readability Measurement of Health Texts. | Sasikiran Kandula, Qing Zeng-Treitler |
| 2008 | AMIA | Improving Patient Comprehension and Recall of Discharge Instructions by Supplementing Free Texts with Pictographs. | Qing Zeng-Treitler, Hyeoneui Kim, Martha Hunter |
| 2007 | AMIA | Towards Consumer-Friendly PHRs: Patients' Experience with Reviewing Their Health Records. | Alla Keselman, Laura Slaughter, Catherine Arnott-Smith, Hyeoneui Kim, Guy Divita, Allen C. Browne, Christopher Tsai, Qing Zeng-Treitler |
| 2007 | AMIA | Beyond Surface Characteristics: A New Health Text-Specific Readability Measurement. | Hyeoneui Kim, Sergey Goryachev, Graciela Rosemblat, Allen C. Browne, Alla Keselman, Qing Zeng-Treitler |
| 2007 | AMIA | Making Texts in Electronic Health Records Comprehensible to Consumers: A Prototype Translator. | Qing Zeng-Treitler, Sergey Goryachev, Hyeoneui Kim, Alla Keselman, Douglas Rosendale |