| 2026 | EACL | Better Generalizing to Unseen Concepts: An Evaluation Framework and An LLM-Based Auto-Labeled Pipeline for Biomedical Concept Recognition. | Shanshan Liu, Noriki Nishida, Fei Cheng, Narumi Tokunaga, Rumana Ferdous Munne, Yuki Yamagata, Kouji Kozaki, Takehito Utsuro, Yuji Matsumoto |
| 2025 | ACL | MA-COIR: Leveraging Semantic Search Index and Generative Models for Ontology-Driven Biomedical Concept Recognition. | Shanshan Liu, Noriki Nishida, Rumana Ferdous Munne, Narumi Tokunaga, Yuki Yamagata, Kouji Kozaki, Yuji Matsumoto |
| 2025 | COLING | Zero-Shot Entailment Learning for Ontology-Based Biomedical Annotation Without Explicit Mentions. | Rumana Ferdous Munne, Noriki Nishida, Shanshan Liu, Narumi Tokunaga, Yuki Yamagata, Kouji Kozaki, Yuji Matsumoto |
| 2025 | EMNLP | Entity Profile Generation and Reasoning with LLMs for Entity Alignment. | Rumana Ferdous Munne, Md. Mostafizur Rahman, Yuji Matsumoto |
| 2020 | HAIS | Joint Entity Summary and Attribute Embeddings for Entity Alignment Between Knowledge Graphs. | Rumana Ferdous Munne, Ryutaro Ichise |