| 2025 | HAIS | Advanced Decomposition-Based Bioinspired Algorithms for Multiobjective Phylogenetics. | Sergio Santander-Jimnez, Miguel A. Vega-Rodrguez |
| 2023 | CHASE | Interpreting High Order Epistasis Using Sparse Transformers. | Miguel Graa, Diogo Marques, Sergio Santander-Jimnez, Leonel Sousa, Aleksandar Ilic |
| 2022 | ICPP | Tensor-Accelerated Fourth-Order Epistasis Detection on GPUs. | Ricardo Nobre, Aleksandar Ilic, Sergio Santander-Jimnez, Leonel Sousa |
| 2021 | FCCM | HEDAcc: FPGA-based Accelerator for High-order Epistasis Detection. | Gaspar Ribeiro, Nuno Neves, Sergio Santander-Jimnez, Aleksandar Ilic |
| 2021 | ICPP | Fourth-Order Exhaustive Epistasis Detection for the xPU Era. | Ricardo Nobre, Aleksandar Ilic, Sergio Santander-Jimnez, Leonel Sousa |
| 2020 | EuroPar | Heterogeneous CPU+iGPU Processing for Efficient Epistasis Detection. | Rafael Campos, Diogo Marques, Sergio Santander-Jimnez, Leonel Sousa, Aleksandar Ilic |
| 2020 | JSSPP | Accelerating 3-Way Epistasis Detection with CPU+GPU Processing. | Ricardo Nobre, Sergio Santander-Jimnez, Leonel Sousa, Aleksandar Ilic |
| 2019 | HAIS | Analysis of MOEA/D Approaches for Inferring Ancestral Relationships. | Sergio Santander-Jimnez, Miguel A. Vega-Rodrguez, Leonel Sousa |
| 2017 | ICA3PP | Parallel Multi-objective Optimization for High-Order Epistasis Detection. | Daniel Gallego-Snchez, Jos M. Granado Criado, Sergio Santander-Jimnez, lvaro Rubio-Largo, Miguel A. Vega-Rodrguez |
| 2016 | EuroPar | Improving Multiobjective Phylogenetic Searches by Using a Parallel \varepsilon -Dominance Based Adaptation of the Firefly Algorithm. | Sergio Santander-Jimnez, Miguel A. Vega-Rodrguez |
| 2014 | CLUSTER | Applying OpenMP-based parallel implementations of NSGA-II and SPEA2 to study phylogenetic relationships. | Sergio Santander-Jimnez, Miguel A. Vega-Rodrguez |
| 2013 | GECCO | A comparative study on distance methods applied to a multiobjective firefly algorithm for phylogenetic inference. | Sergio Santander-Jimnez, Miguel A. Vega-Rodrguez |
| 2012 | ISPA | Evaluating the Performance of a Parallel Multiobjective Artificial Bee Colony Algorithm for Inferring Phylogenies on Multicore Architectures. | Sergio Santander-Jimnez, Miguel ngel Vega Rodrguez, Juan Antonio Gmez Pulido, Juan Manuel Snchez-Prez |