| 2026 | AIME | AI-Informed 30-Day MACE Risk Predictions in ED Arrivals. | Ben J. Gross, M. D. Radha Patel, Kai Zheng, Shamim Nemati, Mattheus Ramsis |
| 2025 | BSN | Photoplethysmography Signals and Their Correlation with Peripheral Artery Disease. | Ava J. Fascetti, Mustafa H. Naguib, Elsie G. Ross, Chris Longhurst, Pam R. Taub, Shamim Nemati, Edward J. Wang, Mattheus Ramsis |
| 2022 | AMIA | Identifying Diagnostic Opportunities Using Clinical Trajectories. | Jejo D. Koola, David Laub, Shamim Nemati, Robert El-Kareh |
| 2022 | AMIA | Implementation of KIDMATCH: A Clinical Decision Support Tool for Diagnosing Pediatric Patients with Multisystem Inflammatory Syndrome and Kawasaki Disease. | Jonathan Y. Lam, Andrew Richardson, Adriana H. Tremoulet, John Kanegaye, Chisato Shimizu, Nicole Stadnick, Jane C. Burns, Shamim Nemati, Michael A. Gardiner |
| 2022 | AMIA | A Comparison of Uncertainty Estimation Methods for Deep Learning-based Clinical Risk Scores. | Archil K. Srivastava, Supreeth P. Shashikumar, Shamim Nemati |
| 2020 | AMIA | Contextual Embeddings from Clinical Notes Improves Prediction of Sepsis. | Fatemeh Amrollahi, Supreeth P. Shashikumar, Fereshteh Razmi, Shamim Nemati |
| 2020 | PSB | Addressing the Credit Assignment Problem in Treatment Outcome Prediction Using Temporal DifferenceLearning. | Sahar Harati, Andrea Crowell, Helen S. Mayberg, Shamim Nemati |
| 2019 | AMIA | Assessing Contribution of Higher Order Clinical Risk Factors to Prediction of Outcome in Aneurysmal Subarachnoid Hemorrhage Patients. | Azade Tabaie, Shamim Nemati, Jason Allen, Charlotte Chung, Flavia Queiroga, Won-Jun Kuk, Adam Prater |
| 2018 | AAAI | Personalized Medication Dosing Using Volatile Data Streams. | Mohammad M. Ghassemi, Tuka Al Hanai, M. Brandon Westover, Roger G. Mark, Shamim Nemati |
| 2018 | AMIA | DataScope - Enabling Scientific Mashups for Data Exploration, Hypothesis Generation, and Visual Analytics from Large Biomedical and Clinical Datasets. | Sapoonjyoti Duttaduwarah, Ganesh R. Iyer, Shamim Nemati, Ashish Sharma |
| 2018 | KDD | Detection of Paroxysmal Atrial Fibrillation using Attention-based Bidirectional Recurrent Neural Networks. | Supreeth Prajwal Shashikumar, Amit J. Shah, Gari D. Clifford, Shamim Nemati |
| 2017 | ICDE | Patient Flow Prediction via Discriminative Learning of Mutually-Correcting Processes (Extended Abstract). | Hongteng Xu, Weichang Wu, Shamim Nemati, Hongyuan Zha |
| 2017 | PSB | The Training of Next Generation Data Scientists in Biomedicine. | Lana X. Garmire, Stephen V. Gliske, Quynh C. Nguyen, Jonathan H. Chen, Shamim Nemati, John D. Van Horn, Jason H. Moore, Carol Shreffler, Michelle Dunn |
| 2006 | ICIP | Visual Target Tracking using Improved and Computationally Efficient Particle Filtering. | Yan Zhai, Mark B. Yeary, Jean-Charles Noyer, Joseph P. Havlicek, Shamim Nemati, Patrick Lanvin |