| 2022 | AMIA | Implementing a Behavioral Health Group Scheduling and Therapy System. | Saeid Pournejati, David Hendricks, Heather Bixby, Sina Madani |
| 2019 | AMIA | Scalable Dimensionality Reduction in Patient Medication Domain: A Use Case for ATC Terminology Mapping for Machine Learning Models. | Sina Madani, Colin Walsh, Joseph Huenecke, Jeff Byrd, Asli Weitkamp |
| 2019 | AMIA | Similarity of Medical Concepts among Submitted Questions in Community-Driven Consumer Health Websites. | Hamid Naderi, Sina Madani, Behzad Kiani, Kobra Etminani |
| 2019 | AMIA | A Novel Classification of Inherited Retinal Dystrophies. | Hamideh Sabbaghi, Sina Madani, Narsis Daftarian, Fatemeh Suri, Abbas Sheikhtaheri, Proshat Saviz, Farid Khorrami, Hamid Ahmadieh |
| 2018 | AMIA | Evaluation of Locally Defined Laboratory Test Names within an Electronic Medical Record System. | Sina Madani, Bryant Ferguson, Scott D. Nelson, Asli O. Weitkamp |
| 2018 | MODELS | Parallel execution of first-order operations. | Sina Madani, Dimitrios S. Kolovos, Richard F. Paige |
| 2017 | AMIA | Leveraging SNOMED CT Relationships for Mapping Disease Codes with Different Levels of Abstraction between EHR Systems. | Sina Madani, Shari Just, Scott D. Nelson, S. Trent Rosenbloom, Asli O. Weitkamp |
| 2017 | AMIA | Assessment of Laboratory System-Assigned LOINC Codes for Common Tests. | Sharidan K. Parr, Shuanghui Luo, Sina Madani, S. Trent Rosenbloom |
| 2016 | AMIA | Use of SNOMED CT Relationships for Optimizing Automatically Extracted Problem List Entities from Clinical Narratives. | Sina Madani, Jerry Henderson |
| 2016 | AMIA | Development of an Oncology Subset of SNOMED CT Based on Patient Notes. | Sina Madani, Jerry Henderson, Kin Wah Fung |
| 2016 | AMIA | Use of an Interface Terminology for Evaluating Terminology Coverage for a Clinical Decision Support System. | Asli Weitkamp, Sina Madani, S. Trent Rosenbloom |
| 2016 | MODELS | Re-Implementing Apache Thrift using Model-Driven Engineering Technologies: An Experience Report. | Sina Madani, Dimitris S. Kolovos |
| 2015 | AMIA | Evaluation of a Self-Triage Decision Aid System in Pregnancy-Induced Hypertension and Diabetes Mellitus: Preliminary Results of a Randomized Control Trial. | Azam Aslani, Fatemeh Tara, Leila Galichi, Sina Madani, Ameen Abu-Hanna, Saeid Eslami |
| 2015 | AMIA | A Framework for Incorporating Changes to a Reference Terminology on a Mapped Enterprise Terminology Subset. | Sina Madani, S. Trent Rosenbloom |
| 2014 | AMIA | Use of Natural Language Processing in Terminology Coverage Analysis. | Sina Madani, Dean F. Sittig, Micahael Riben |
| 2013 | AMIA | Ontology-Based Entity Extraction of Quality Metrics from Narrative Texts. | Sina Madani, Dean F. Sittig, Hua Xu, Parsa Mirhaji, Kim Dunn, Reza Alemy |
| 2006 | AMIA | Prevalence and Inaccessibility of URLs in the Biomedical Literature. | Sina Madani, Randy J. Carnevale, Stephany Duda, Michael T. Feyder, Dominik Aronsky |
| 2003 | AMIA | Factors Affecting the Sustainability of Information Technology Applications in Health Care. | Sina Madani, Dominik Aronsky |