| 2026 | SEAMS | Runtime Self-Optimization Through Knowledge-Driven Design Space Reduction. | Luca Brodo, Giuseppe Scalora, Stefan Henkler |
| 2025 | INDIN | Adaptive Algorithmic Determination for Energy-Efficient UAV Swarm Pathfinding in a Smart Argiculture Context. | Ahmed Amine Tabbassi, Christopher Beck, Kristian Rother, Stefan Henkler |
| 2023 | INDIN | Introducing a group-based remote laboratory for embedded education. | Christopher Beck, Luca Brodo, Camila Belen Quintanilla Docmac, Stefan Henkler, Achim Rettberg, Kristian Rother |
| 2023 | INDIN | A Prototype for Lab-Based System Testing of Cyber Physical Systems for Smart Farming. | Aluko Tunde Oluwayemi, Kristian Rother, Stefan Henkler |
| 2014 | INDIN | Evaluation of a state-based real-time scheduling analysis technique. | Tayfun Gezgin, Stefan Henkler, Ingo Stierand, Achim Rettberg |
| 2014 | ISSRE | Integrating the Security Aspect into Design Space Exploration of Embedded Systems. | Ingo Stierand, Sunil Malipatlolla, Sibylle Frschle, Alexander Sthring, Stefan Henkler |
| 2014 | RTCSA | Impact analysis for timing requirements on real-time systems. | Tayfun Gezgin, Stefan Henkler, Ingo Stierand, Achim Rettberg |
| 2013 | ISORC | Contracts for evolving systems. | Christoph Etzien, Tayfun Gezgin, Sibylle Frschle, Stefan Henkler, Achim Rettberg |
| 2012 | ISORC | Towards a Rigorous Modeling Formalism for Systems of Systems. | Tayfun Gezgin, Christoph Etzien, Stefan Henkler, Achim Rettberg |
| 2010 | ICSE | Legacy component integration by the Fujaba real-time tool suite. | Stefan Henkler, Jan Meyer, Wilhelm Schfer, Markus von Detten, Ulrich Nickel |
| 2010 | ISORC | Model-Driven Runtime Resource Predictions for Advanced Mechatronic Systems with Dynamic Data Structures. | Stefan Henkler, Simon Oberthr, Holger Giese, Andreas Seibel |
| 2009 | ICSE | Synthesis of timed behavior from scenarios in the Fujaba Real-Time Tool Suite. | Stefan Henkler, Joel Greenyer, Martin Hirsch, Wilhelm Schfer, Kahtan Alhawash, Tobias Eckardt, Christian Heinzemann, Renate Lffler, Andreas Seibel, Holger Giese |
| 2008 | ICSE | Modeling collaborations with dynamic structural adaptation in mechatronic UML. | Martin Hirsch, Stefan Henkler, Holger Giese |
| 2008 | ICSE | Safety of component-based systems: analysis and improvement using Fujaba4Eclipse. | Matthias Tichy, Stefan Henkler, Matthias Meyer, Markus von Detten |
| 2007 | ICSE | Tool Support for Developing Advanced Mechatronic Systems: Integrating the Fujaba Real-Time Tool Suite with CAMeL-View. | Sven Burmester, Holger Giese, Stefan Henkler, Martin Hirsch, Matthias Tichy, Alfonso Gambuzza, Eckehard Mnch, Henner Vcking |
| 2007 | ICSE | Combining Formal Verification and Testing for Correct Legacy Component Integration in Mechatronic UML. | Holger Giese, Stefan Henkler, Martin Hirsch |
| 2006 | ISSTA | Architecture-driven platform independent deterministic replay for distributed hard real-time systems. | Holger Giese, Stefan Henkler |