| 2003 | DIS | Discovering Ecosystem Models from Time-Series Data. | Dileep George, Kazumi Saito, Pat Langley, Stephen D. Bay, Kevin R. Arrigo |
| 2003 | DIS | Inducing Biological Models from Temporal Gene Expression Data. | Kazumi Saito, Dileep George, Stephen D. Bay, Jeff Shrager |
| 2003 | ICML | Robust Induction of Process Models from Time-Series Data. | Pat Langley, Dileep George, Stephen D. Bay, Kazumi Saito |
| 2003 | KDD | Mining distance-based outliers in near linear time with randomization and a simple pruning rule. | Stephen D. Bay, Mark Schwabacher |
| 2003 | PSB | Incorporating Biological Knowledge into Evaluation of Causal Regulatory Hypotheses. | Lonnie Chrisman, Pat Langley, Stephen D. Bay |
| 2002 | DIS | Revising Qualitative Models of Gene Regulation. | Kazumi Saito, Stephen D. Bay, Pat Langley |
| 2000 | ICML | Characterizing Model Erros and Differences. | Stephen D. Bay, Michael J. Pazzani |
| 2000 | KDD | Multivariate discretization of continuous variables for set mining. | Stephen D. Bay |
| 1999 | KDD | Detecting Change in Categorical Data: Mining Contrast Sets. | Stephen D. Bay, Michael J. Pazzani |
| 1998 | ICML | Combining Nearest Neighbor Classifiers Through Multiple Feature Subsets. | Stephen D. Bay |