| 2017 | MICCAI | DARWIN: Deformable Patient Avatar Representation With Deep Image Network. | Vivek Kumar Singh, Kai Ma, Birgi Tamersoy, Yao-Jen Chang, Andreas Wimmer, Thomas O'Donnell, Terrence Chen |
| 2009 | CBMS | A software system for stent planning, stent simulation and follow-up examinations in the vascular domain. | Jan Egger, Stefan Grokopf, Thomas O'Donnell, Bernd Freisleben |
| 2005 | MICCAI | Tracking and Analysis of Cine-Delayed Enhancement MR. | Thomas O'Donnell, Engin Dikici, Randolph Setser, Richard D. White |
| 2004 | MICCAI | Quantification of Delayed Enhancement MR Images. | Engin Dikici, Thomas O'Donnell, Randolph Setser, Richard D. White |
| 2001 | MICCAI | A 3D Statistical Shape Model for the Left Ventricle of the Heart. | Hui Luo, Thomas O'Donnell |
| 2000 | CVPR | Multi-Modality Model-Based Registration in the Cardiac Domain. | Thomas O'Donnell, Shmuel Aharon, Alok Gupta, Gareth Funka-Lea, Sandra Simon Halliburton, Richard D. White |
| 1998 | ICCV | A Cooperative Framework for Segmentation Using 2D Active Contours and 3D Hybrid Models as Applied to Branching Cylindrical Structures. | Thomas O'Donnell, Marie-Pierre Dubuisson-Jolly, Alok Gupta |
| 1998 | WACV | 3-D cardiac volume analysis using magnetic resonance imaging. | Thomas O'Donnell, Gareth Funka-Lea |
| 1996 | CVPR | Global Models with Parametric Offsets as Applied to Cardiac Motion Recovery. | Thomas O'Donnell, Terrance E. Boult, Alok Gupta |
| 1994 | CVPR | The extruded generalized cylinder: a deformable model for object recovery. | Thomas O'Donnell, Terrance E. Boult, Xi-Sheng Fang, Alok Gupta |
| 1994 | ICPR | A periodic generalized cylinder model with local deformations for tracking closed contours exhibiting repeating motion. | Thomas O'Donnell, Alok Gupta, Terrance E. Boult |