| 1996 | CHI | Using the Web Instead of a Window System. | James Rice, Adam Farquhar, Philippe Piernot, Thomas R. Gruber |
| 1995 | IJCAI | The Generic Frame Protocol. | Peter D. Karp, Karen L. Myers, Thomas R. Gruber |
| 1994 | KR | An Ontology for Engineering Mathematics. | Thomas R. Gruber, Gregory R. Olsen |
| 1993 | AAAI | Generating Explanations of Device Behavior Using Compositional Modeling and Causal Ordering. | Patrice O. Gautier, Thomas R. Gruber |
| 1993 | IJCAI | Machine-generated Explanations of Engineering Models: A Compositional Modeling Approach. | Thomas R. Gruber, Patrice O. Gautier |
| 1992 | KR | The DARPA Knowledge Sharing Effort: A Progress Report. | Ramesh S. Patil, Richard Fikes, Peter F. Patel-Schneider, Donald P. McKay, Timothy W. Finin, Thomas R. Gruber, Robert Neches |
| 1991 | ICML | Design Rationale Capture as Knowledge Acquisition. | Thomas R. Gruber, Catherine Baudin, John H. Boose, Jay Webber |
| 1991 | KR | The Role of Common Ontology in Achieving Sharable, Reusable Knowledge Bases. | Thomas R. Gruber |
| 1987 | IJCAI | Knowledge Engineering Tools at the Architecture Level. | Thomas R. Gruber, Paul R. Cohen |