| 2025 | AAAI | Bi-level Contrastive Learning for Knowledge-Enhanced Molecule Representations. | Pengcheng Jiang, Cao Xiao, Tianfan Fu, Parminder Bhatia, Taha A. Kass-Hout, Jimeng Sun, Jiawei Han |
| 2025 | EMNLP | LIFTED: Multimodal Clinical Trial Outcome Prediction via Large Language Models and Mixture-of-Experts. | Wenhao Zheng, Liaoyaqi Wang, Dongsheng Peng, Hongxia Xu, Yun Li, Hongtu Zhu, Tianfan Fu, Huaxiu Yao |
| 2024 | ICML | Graph Adversarial Diffusion Convolution. | Songtao Liu, Jinghui Chen, Tianfan Fu, Lu Lin, Marinka Zitnik, Dinghao Wu |
| 2024 | KDD | Artificial Intelligence and Data Science for Healthcare: Bridging Data-Centric AI and People-Centric Healthcare. | Shenda Hong, Daoxin Yin, Gongzheng Tang, Tianfan Fu, Liantao Ma, Junyi Gao, Mengling Feng, Mai Wang, Yu Yang, Fei Wang, Hongfang Liu, Luxia Zhang |
| 2022 | ICLR | Differentiable Scaffolding Tree for Molecule Optimization. | Tianfan Fu, Wenhao Gao, Cao Xiao, Jacob Yasonik, Connor W. Coley, Jimeng Sun |
| 2022 | KDD | SIPF: Sampling Method for Inverse Protein Folding. | Tianfan Fu, Jimeng Sun |
| 2022 | KDD | Antibody Complementarity Determining Regions (CDRs) design using Constrained Energy Model. | Tianfan Fu, Jimeng Sun |
| 2021 | AAAI | MIMOSA: Multi-constraint Molecule Sampling for Molecule Optimization. | Tianfan Fu, Cao Xiao, Xinhao Li, Lucas M. Glass, Jimeng Sun |
| 2021 | KDD | Probabilistic and Dynamic Molecule-Disease Interaction Modeling for Drug Discovery. | Tianfan Fu, Cao Xiao, Cheng Qian, Lucas M. Glass, Jimeng Sun |
| 2020 | AAAI | CORE: Automatic Molecule Optimization Using Copy & Refine Strategy. | Tianfan Fu, Cao Xiao, Jimeng Sun |
| 2019 | IJCAI | DDL: Deep Dictionary Learning for Predictive Phenotyping. | Tianfan Fu, Trong Nghia Hoang, Cao Xiao, Jimeng Sun |
| 2018 | CoNLL | Continuous Word Embedding Fusion via Spectral Decomposition. | Tianfan Fu, Cheng Zhang, Stephan Mandt |
| 2017 | AISTATS | CPSG-MCMC: Clustering-Based Preprocessing method for Stochastic Gradient MCMC. | Tianfan Fu, Zhihua Zhang |
| 2016 | UAI | Quasi-Newton Hamiltonian Monte Carlo. | Tianfan Fu, Luo Luo, Zhihua Zhang |
| 2014 | ICASSP | Stochastic data sweeping for fast DNN training. | Wei Deng, Yanmin Qian, Yuchen Fan, Tianfan Fu, Kai Yu |
| 2014 | IJCNN | Speaker verification with deep features. | Yuan Liu, Tianfan Fu, Yuchen Fan, Yanmin Qian, Kai Yu |
| 2014 | Interspeech | Tandem deep features for text-dependent speaker verification. | Tianfan Fu, Yanmin Qian, Yuan Liu, Kai Yu |