| 2026 | ESANN | Distillation of a tractable model from the VQ-VAE. | Armin Hadzic, Milan Papez, Toms Pevn |
| 2025 | AAAI | State Encodings for GNN-Based Lifted Planners. | Rostislav Horck, Gustav Sr, Vtezslav Simek, Toms Pevn |
| 2025 | ICDM | Differentiable Distance Between Hierarchically-Structured Data. | Matej Zorek, Toms Pevn, Vclav Smdl |
| 2025 | ICLR | Generating Likely Counterfactuals Using Sum-Product Networks. | Jiri Nemecek, Toms Pevn, Jakub Marecek |
| 2025 | KDD | Bias Detection via Maximum Subgroup Discrepancy. | Jiri Nemecek, Mark Kozdoba, Illia Kryvoviaz, Toms Pevn, Jakub Marecek |
| 2025 | UAI | Probabilistic Graph Circuits: Deep Generative Models for Tractable Probabilistic Inference over Graphs. | Milan Papez, Martin Rektoris, Vclav Smdl, Toms Pevn |
| 2024 | ICLR | Sum-Product-Set Networks: Deep Tractable Models for Tree-Structured Graphs. | Milan Papez, Martin Rektoris, Vclav Smdl, Toms Pevn |
| 2023 | EPIA | Heuristic Search Optimisation Using Planning and Curriculum Learning Techniques. | Leah Chrestien, Toms Pevn, Stefan Edelkamp, Antonn Komenda |
| 2023 | ESORICS | NASimEmu: Network Attack Simulator & Emulator for Training Agents Generalizing to Novel Scenarios. | Jaromr Janisch, Toms Pevn, Viliam Lis |
| 2019 | AAAI | Classification with Costly Features Using Deep Reinforcement Learning. | Jaromr Janisch, Toms Pevn, Viliam Lis |
| 2017 | ISNN | Using Neural Network Formalism to Solve Multiple-Instance Problems. | Toms Pevn, Petr Somol |
| 2017 | SP | Malware Detection by Analysing Network Traffic with Neural Networks. | Paul Prasse, Luks Machlica, Toms Pevn, Jir Havelka, Tobias Scheffer |
| 2017 | SISAP | Malware Discovery Using Behaviour-Based Exploration of Network Traffic. | Jakub Lokoc, Toms Grosup, Premysl Cech, Toms Pevn, Toms Skopal |
| 2016 | CCS | Discriminative Models for Multi-instance Problems with Tree Structure. | Toms Pevn, Petr Somol |
| 2016 | SISAP | Feature Extraction and Malware Detection on Large HTTPS Data Using MapReduce. | Premysl Cech, Jan Kohout, Jakub Lokoc, Toms Komrek, Jakub Marousek, Toms Pevn |
| 2015 | ICASSP | Unsupervised detection of malware in persistent web traffic. | Jan Kohout, Toms Pevn |
| 2015 | IM | Automatic discovery of web servers hosting similar applications. | Jan Kohout, Toms Pevn |
| 2013 | ICASSP | Attacking the IDS learning processes. | Toms Pevn, Martin Komon, Martin Rehk |
| 2005 | IWDW | Towards Multi-class Blind Steganalyzer for JPEG Images. | Toms Pevn, Jessica J. Fridrich |