| 2025 | AIES | Responsible AI in the OSS: Reconciling Innovation with Risk Assessment and Disclosure. | Mahasweta Chakraborti, Bert Joseph Prestoza, Nicholas Vincent, Vladimir Filkov, Seth Frey |
| 2024 | CHI | Do We Run How We Say We Run? Formalization and Practice of Governance in OSS Communities. | Mahasweta Chakraborti, Curtis Atkisson, Stefan Stanciulescu, Vladimir Filkov, Seth Frey |
| 2023 | ICSE | On the Self-Governance and Episodic Changes in Apache Incubator Projects: An Empirical Study. | Likang Yin, Xiyu Zhang, Vladimir Filkov |
| 2023 | MSR | GitHub OSS Governance File Dataset. | Yibo Yan, Seth Frey, Amy X. Zhang, Vladimir Filkov, Likang Yin |
| 2022 | MSR | Exploring Apache Incubator Project Trajectories with APEX. | Anirudh Ramchandran, Likang Yin, Vladimir Filkov |
| 2021 | MSR | Apache Software Foundation Incubator Project Sustainability Dataset. | Likang Yin, Zhiyuan Zhang, Qi Xuan, Vladimir Filkov |
| 2021 | NSPW | Beyond NVD: Cybersecurity meets the Semantic Web. | Ral Aranovich, Muting Wu, Dian Yu, Katya Katsy, Benyamin Ahmadnia, Matthew Bishop, Vladimir Filkov, Kenji Sagae |
| 2020 | ICSE | Software visualization and deep transfer learning for effective software defect prediction. | Jinyin Chen, Keke Hu, Yue Yu, Zhuangzhi Chen, Qi Xuan, Yi Liu, Vladimir Filkov |
| 2019 | ICSE | Tool choice matters: JavaScript quality assurance tools and usage outcomes in GitHub projects. | David Kavaler, Asher Trockman, Bogdan Vasilescu, Vladimir Filkov |
| 2019 | ICSE | Socio-technical work-rate increase associates with changes in work patterns in online projects. | Farhana Sarker, Bogdan Vasilescu, Kelly Blincoe, Vladimir Filkov |
| 2017 | MSR | Some from here, some from there: cross-project code reuse in GitHub. | Mohammad Gharehyazie, Baishakhi Ray, Vladimir Filkov |
| 2016 | ICSE | The sky is not the limit: multitasking across GitHub projects. | Bogdan Vasilescu, Kelly Blincoe, Qi Xuan, Casey Casalnuovo, Daniela E. Damian, Premkumar T. Devanbu, Vladimir Filkov |
| 2015 | CHI | Gender and Tenure Diversity in GitHub Teams. | Bogdan Vasilescu, Daryl Posnett, Baishakhi Ray, Mark G. J. van den Brand, Alexander Serebrenik, Premkumar T. Devanbu, Vladimir Filkov |
| 2015 | ICSE | Assert Use in GitHub Projects. | Casey Casalnuovo, Premkumar T. Devanbu, Ablio Oliveira, Vladimir Filkov, Baishakhi Ray |
| 2015 | ICSE | Perceptions of Diversity on Git Hub: A User Survey. | Bogdan Vasilescu, Vladimir Filkov, Alexander Serebrenik |
| 2015 | MSR | A Data Set for Social Diversity Studies of GitHub Teams. | Bogdan Vasilescu, Alexander Serebrenik, Vladimir Filkov |
| 2015 | MSR | Wait for It: Determinants of Pull Request Evaluation Latency on GitHub. | Yue Yu, Huaimin Wang, Vladimir Filkov, Premkumar T. Devanbu, Bogdan Vasilescu |
| 2014 | CSCW | How social Q&A sites are changing knowledge sharing in open source software communities. | Bogdan Vasilescu, Alexander Serebrenik, Premkumar T. Devanbu, Vladimir Filkov |
| 2014 | ICSE | Building it together: synchronous development in OSS. | Qi Xuan, Vladimir Filkov |
| 2013 | ICSE | Dual ecological measures of focus in software development. | Daryl Posnett, Raissa M. D'Souza, Premkumar T. Devanbu, Vladimir Filkov |
| 2013 | MSR | Asking for (and about) permissions used by Android apps. | Ryan Stevens, Jonathan Ganz, Vladimir Filkov, Premkumar T. Devanbu, Hao Chen |
| 2012 | MSR | MIC check: A correlation tactic for ESE data. | Daryl Posnett, Premkumar T. Devanbu, Vladimir Filkov |
| 2010 | MSR | Validity of network analyses in Open Source Projects. | Roozbeh Nia, Christian Bird, Premkumar T. Devanbu, Vladimir Filkov |
| 2009 | SDM | Structure and Dynamics of Research Collaboration in Computer Science. | Christian Bird, Earl T. Barr, Andre Nash, Premkumar T. Devanbu, Vladimir Filkov, Zhendong Su |
| 2008 | ALENEX | Consensus Clustering Algorithms: Comparison and Refinement. | Andrey Goder, Vladimir Filkov |
| 2006 | BIBE | Methods for Random Modularization of Biological Networks. | Zachary M. Saul, Vladimir Filkov |
| 2005 | RECOMB | A Linear-Time Algorithm for the Perfect Phylogeny Haplotyping (PPH) Problem. | Zhihong Ding, Vladimir Filkov, Dan Gusfield |
| 2004 | RECOMB | Inferring Cis-region Hierarchies from Patterns in Time-Course Gene Expression Data | Vladimir Filkov, Nameeta Y. Shah |
| 2003 | ICTAI | Integrating Microarray Data by Consensus Clustering. | Vladimir Filkov, Steven Skiena |
| 2001 | RECOMB | Analysis techniques for microarray time-series data. | Vladimir Filkov, Steven Skiena, Jizu Zhi |
| 1999 | RECOMB | Identifying gene regulatory networks from experimental data. | Ting Chen, Vladimir Filkov, Steven Skiena |