| 2022 | AMIA | The Validitron Sandbox: a cloud environment to support prototyping, workflow design and integration testing of data-focused digital health applications. | Kit Huckvale, Wendy W. Chapman, Daniel Capurro |
| 2021 | AMIA | Impact of Comorbidity Profiles on Pain Trajectories in Breast Cancer Patients by Using Electronic Health Record Data. | Jia-Wen Guo, Katherine A. Sward, Ann M. Lyons, Susan L. Beck, Gary W. Donaldson, Wendy W. Chapman, Lewis J. Frey |
| 2020 | AMIA | Training Women for Leadership in Informatics and Digital Health: A Report from the Inaugural Women in AMIA Leadership Program. | Wendy W. Chapman, Adela Grando, Merida L. Johns, Guergana Savova, Maia Hightower |
| 2020 | AMIA | A Corpus Analysis of Social Isolation from Clinical Notes of Patients with Cancer. | Jia-Wen Guo, Christina L. Radloff, Katherine A. Sward, Susan L. Beck, Wendy W. Chapman, Gary W. Donaldson, Lewis J. Frey |
| 2019 | AMIA | Determination of Marital Status of Patients from Structured and Unstructured Electronic Healthcare Data. | Brian T. Bucher, Jianlin Shi, Robert J. Pettit, Jeffrey P. Ferraro, Wendy W. Chapman, Adi V. Gundlapalli |
| 2019 | AMIA | Researchers' Perspectives on Symptoms related to Cancer Pain: A Network Analysis of Literatures. | Jia-Wen Guo, Christina L. Radloff, Susan L. Beck, Gary W. Donaldson, Wendy W. Chapman, Katherine A. Sward, Lewis J. Frey |
| 2019 | AMIA | Extracting Disease Onset from Family History Comments in the Electronic Health Record using Fast Healthcare Interoperability Resources. | Jianlin Shi, Kensaku Kawamoto, Wendy Kohlmann, Danielle L. Mowery, Richard L. Bradshaw, Subhadeep Deep, Wendy W. Chapman, Guilherme Del Fiol |
| 2019 | AMIA | Using Natural Language Processing to improve EHR Structured Data-based Surgical Site Infection Surveillance. | Jianlin Shi, Siru Liu, Liese C. Pruitt, Carolyn Luppens, Jeffrey P. Ferraro, Adi V. Gundlapalli, Wendy W. Chapman, Brian T. Bucher |
| 2018 | AMIA | Natural Language Processing at Scale - Perspectives from Five Healthcare Organizations. | Rebecca Crowley Jacobson, Wendy W. Chapman, Hongfang Liu, Olga V. Patterson, Daniel S. Zisook |
| 2018 | AMIA | Detection of Healthcare-Associated Infections Using Electronic Health Record Data. | Siru Liu, Jeffrey P. Ferraro, Adi V. Gundlapalli, Wendy W. Chapman, Brian T. Bucher |
| 2018 | AMIA | Detecting Current Episodes of Cholecystitis-related Pain from Veterans Affairs Clinical Notes using Natural Language Processing. | Danielle L. Mowery, Luke Martin, Brett R. South, Ellen Morrow, William Peche, Eric Wiesner, Wendy W. Chapman, Benjamin S. Brooke |
| 2018 | AMIA | Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora. | Ruth M. Reeves, Brett R. South, Glenn T. Gobbel, Lee M. Christensen, Paul Thompson, Wendy W. Chapman, Michael E. Matheny, Jeremiah R. Brown |
| 2017 | AMIA | "My work will surely speak for itself: " Visibility, Networking, and Self Promotion in Informatics. | Wendy W. Chapman, Murielle S. Beene, Omolola Ogunyemi, Genevieve B. Melton, Laura K. Wiley |
| 2017 | AMIA | Detecting Evidence of Intra-abdominal Surgical Site Infections from Radiology Reports Using Natural Language Processing. | Alec B. Chapman, Danielle L. Mowery, Douglas S. Swords, Wendy W. Chapman, Brian T. Bucher |
| 2017 | AMIA | A Comparison of Stroke Classifiers Leveraging Hospital Billing Codes versus Natural Language Processing. | Danielle L. Mowery, Brent D. Hill, Mingyuan Zhang, Wendy W. Chapman, Lisa A. Cannon-Albright, Jennifer Majersik |
| 2016 | AMIA | Understanding patient satisfaction with received healthcare services: A natural language processing approach. | Kristina Doing-Harris, Danielle L. Mowery, Chrissy Daniels, Wendy W. Chapman, Mike Conway |
| 2016 | AMIA | VIP: A Framework for Mining Clinical Concepts Using Knowledge Author Ontologies and Apache UIMA. | Thomas Ginter, Lalindra De Silva, Olga V. Patterson, William Scuba, Wendy W. Chapman, Scott L. DuVall |
| 2016 | AMIA | Women in Informatics Leadership Forum. | Rebecca Jacobson, Suzanne Bakken, Wendy W. Chapman, Valerie Florance, Jessica D. Tenenbaum |
| 2016 | AMIA | A Characterization of Emotional Valence to Support Review of Free-Text Press-Ganey Patient Satisfaction Survey Responses. | Danielle L. Mowery, Kristina M. Doing-Harris, Wendy W. Chapman, Chrissy Daniels, Mike Conway |
| 2016 | AMIA | Event Coreference in Support of Temporal Reasoning in Mental Health Notes. | Ruth M. Reeves, Marcus Verhagen, Cynthia Brandt, Wendy W. Chapman, Michael E. Matheny, Steven H. Brown, Brian Marx, Theodore Speroff |
| 2015 | AMIA | RapTAT: A Tool for Assisted Annotation and Reviewer Training via Online Machine Learning. | Glenn T. Gobbel, Ruth M. Reeves, Brett R. South, Wendy W. Chapman, Jay Jarman, Steven Lay, Michael E. Matheny |
| 2015 | AMIA | Developing Natural Language Processing Systems for Healthcare. | Ruth M. Reeves, Wendy W. Chapman, Dezon Finch, Jennifer H. Garvin, Glenn T. Gobbel |
| 2015 | AMIA | Annotating ADLs and IADLs in Veterans Affairs Clinical Documents. | Brett R. South, Danielle L. Mowery, Lee M. Christensen, Adi V. Gundlapalli, Melissa Tharp, Marzieh Vali, Marjorie E. Carter, Mike Conway, Salomeh Keyhani, Wendy W. Chapman |
| 2015 | AMIA | Towards a Generalizable Time Expression Model for Temporal Reasoning in Clinical Notes. | Sumithra Velupillai, Danielle L. Mowery, Samir E. AbdelRahman, Lee M. Christensen, Wendy W. Chapman |
| 2014 | AMIA | Developing a Knowledge Base for Detecting Carotid Stenosis with pyConText. | Danielle L. Mowery, Daniel Franc, Shazia Ashfaq, Eric Cheng, Tania Zamora, Wendy W. Chapman, Brian E. Chapman |
| 2014 | AMIA | A System Usability Study Assessing a Machine-Assisted Interactive Interface to Support Annotation of Protected Health Information in Clinical Texts. | Brett R. South, Danielle L. Mowery, Chris Leng, Stphane M. Meystre, Wendy W. Chapman |
| 2014 | AMIA | Disease/Disorder Semantic Template Filling - Information Extraction Challenge in the ShARe/CLEF eHealth Evaluation Lab 2014. | Sumithra Velupillai, Danielle L. Mowery, Lee M. Christensen, Noemie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman |
| 2013 | AMIA | An Information Extraction Based Search System for Clinical Records. | Yan Jiao, Wei Wei, Wendy W. Chapman |
| 2013 | AMIA | Schema Builder: A Web-based User Interface for Authoring and Sharing Natural-Language Processing Schemas. | Yang Liu, Melissa Tharp, Matthew Hong, Harry Hochheiser, Wendy W. Chapman |
| 2013 | AMIA | Semantic Annotation of Clinical Events for Generating a Problem List. | Danielle L. Mowery, Pamela W. Jordan, Janyce Wiebe, Henk Harkema, Wendy W. Chapman |
| 2013 | AMIA | Creating a Reference Standard of Acronym and Abbreviation Annotations for the ShARe/CLEF eHealth Challenge 2013. | Danielle L. Mowery, Brett R. South, Jianwei Leng, Laura-Maria Murtola, Riitta Danielsson-Ojala, Sanna Salanter, Wendy W. Chapman |
| 2013 | AMIA | Knowledge Representation for Topic Model Based Discharge Summary Clustering. | Wei Wei, Yan Jiao, Wendy W. Chapman |
| 2012 | AMIA | TxtVect: A Tool for Extracting Features from Clinical Documents. | Abhishek Kumar, Wendy W. Chapman |
| 2008 | AMIA | Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter? | Brett R. South, Wendy W. Chapman, Sylvain Delisle, Shuying Shen, Ericka Kalp, Trish Perl, Matthew H. Samore, Adi V. Gundlapalli |
| 2008 | AMIA | Analysis of a Failed Clinical Decision Support System for Management of Congestive Heart Failure. | Rajiv Wadhwa, Douglas B. Fridsma, Melissa I. Saul, Louis E. Penrod, Shyam Visweswaran, Gregory F. Cooper, Wendy W. Chapman |
| 2006 | AMIA | Evaluating the Effectiveness of Four Contextual Features in Classifying Annotated Clinical Conditions in Emergency Department Reports. | David Chu, John N. Dowling, Wendy W. Chapman |
| 2005 | AMIA | Automating Tissue Bank Annotation from Pathology Reports - Comparison to a Gold Standard Expert Annotation Set. | Kaihong Liu, Kevin J. Mitchell, Wendy W. Chapman, Rebecca S. Crowley |
| 2005 | AMIA | A Software Tool to Assist Researchers in Coding Free Text Clinical Reports. | Manoj Ramachandran, Gregory F. Cooper, Wendy W. Chapman, John N. Dowling |
| 2002 | AMIA | Creating a Software Tool for the Clinical Researcher - the IPS System. | Bruce G. Buchanan, Wendy W. Chapman, Gregory F. Cooper, Paul Hanbury, Mehmet Kayaalp, Manoj Ramachandran, Melissa I. Saul |
| 2002 | AMIA | Rapid deployment of an electronic disease surveillance system in the state of Utah for the 2002 Olympic Winter Games. | Per H. Gesteland, Michael M. Wagner, Wendy W. Chapman, Jeremy U. Espino, Fu-Chiang Tsui, Reed M. Gardner, Robert T. Rolfs, Virginia M. Dato, Brent C. James, Peter J. Haug |
| 2002 | AMIA | Accuracy of three classifiers of acute gastrointestinal syndrome for syndromic surveillance. | Oleg Ivanov, Michael M. Wagner, Wendy W. Chapman, Robert T. Olszewski |
| 2002 | AMIA | Data, network, and application: technical description of the Utah RODS Winter Olympic Biosurveillance System. | Fu-Chiang Tsui, Jeremy U. Espino, Michael M. Wagner, Per H. Gesteland, Oleg Ivanov, Robert T. Olszewski, Zhen Liu, Xiaoming Zeng, Wendy W. Chapman, Weng-Keen Wong, Andrew W. Moore |
| 2001 | AMIA | Combining decision support methodologies to diagnose pneumonia. | Dominik Aronsky, Marcelo Fiszman, Wendy W. Chapman, Peter J. Haug |
| 2001 | AMIA | Evaluation of negation phrases in narrative clinical reports. | Wendy W. Chapman, Will Bridewell, Paul Hanbury, Gregory F. Cooper, Bruce G. Buchanan |
| 2001 | AMIA | IPS: A System That Uses Machine Learning to Help Locate Patient Records for Clinical Research. | Gregory F. Cooper, Bruce G. Buchanan, Wendy W. Chapman, Paul Hanbury, Mehmet Kayaalp, Melissa I. Saul |
| 2000 | AMIA | Contribution of a speech recognition system to a computerized pneumonia guideline in the emergency department. | Wendy W. Chapman, Dominik Aronsky, Marcelo Fiszman, Peter J. Haug |
| 2000 | AMIA | Using Decision Tree Classifiers to Confirm Pneumonia Diagnosis. | David D. Eardley, Dominik Aronsky, Wendy W. Chapman, Peter J. Haug |
| 1999 | AMIA | Comparing expert systems for identifying chest x-ray reports that support pneumonia. | Wendy W. Chapman, Peter J. Haug |
| 1999 | AMIA | Automatic identification of pneumonia related concepts on chest x-ray reports. | Marcelo Fiszman, Wendy W. Chapman, R. Scott Evans, Peter J. Haug |
| 1998 | AMIA | Bayesian modeling for linking causally related observations in chest X-ray reports. | Wendy W. Chapman, Peter J. Haug |