| 2004 | GECCO | Convergence Examples of a Filter-Based Evolutionary Algorithm. | Lauren M. Clevenger, William E. Hart |
| 2004 | WSC | Spares Optimization for the Lockheed Martin Joint Strike Fighter. | Jean-Paul Watson, Michael J. Collins, William E. Hart, Hai Le, Laura Painton Swiler, Bruce Thompson |
| 2002 | GECCO | Alignment Of Protein Structures With A Memetic Evolutionary Algorithm. | Robert D. Carr, William E. Hart, Natalio Krasnogor, Jonathan D. Hirst, Edmund K. Burke, James Smith |
| 2002 | GECCO | On The Convergence Properties Of A Simple Self-adaptive Evolutionary Algorithm. | John DeLaurentis, Lauren Ferguson, William E. Hart |
| 1999 | CEC | A performance analysis of evolutionary pattern search with generalized mutation steps. | William E. Hart, Keith O. Hunter |
| 1999 | GECCO | Comparing Evolutionary Programs and Evolutionary Pattern Search Algorithms: A Drug Docking Application. | William E. Hart |
| 1997 | AMIA | Automated measurement of retinal vascular tortuosity. | William E. Hart, Michael H. Goldbaum, Brad Ct, Paul Kube, Mark R. Nelson |
| 1997 | RECOMB | On the computational complexity of sequence design problems. | William E. Hart |
| 1997 | RECOMB | Lattice and off-lattice side chain models of protein folding (extended abstract): linear time structure prediction better than 86% of optimal. | William E. Hart, Sorin Istrail |
| 1996 | CPM | Invariant Patterns in Crystal Lattices: Implications for Protein Folding Algorithms (Extended Abstract). | William E. Hart, Sorin Istrail |
| 1996 | FOGA | A Stationary Point Convergence Theory for Evolutionary Algorithms. | William E. Hart |
| 1995 | STOC | Fast protein folding in the hydrophobic-hydrophilic model within three-eights of optimal (Extended Abstract). | William E. Hart, Sorin Istrail |
| 1994 | FOGA | The Role of Development in Genetic Algorithms. | William E. Hart, Thomas E. Kammeyer, Richard K. Belew |
| 1994 | ICIP | Registering Retinal Images Using Automatically Selected Control Point Pairs. | William E. Hart, Michael H. Goldbaum |