| 2013 | ADC | JetXSLT: A Resource-Conscious XSLT Processor. | William M. Shui, Raymond K. Wong |
| 2007 | WWW | Querying and maintaining a compact XML storage. | Raymond K. Wong, Franky Lam, William M. Shui |
| 2006 | ADC | Dynamic labeling schemes for ordered XML based on type information. | Damien K. Fisher, Franky Lam, William M. Shui, Raymond K. Wong |
| 2005 | ADC | Querying and Maintaining Ordered XML Data using Relational Databases. | William M. Shui, Franky Lam, Damien K. Fisher, Raymond K. Wong |
| 2004 | DASFAA | Skipping Strategies for Efficient Structural Joins. | Franky Lam, William M. Shui, Damien K. Fisher, Raymond K. Wong |
| 2004 | DEXA | Effective Clustering Schemes for XML Databases. | William M. Shui, Damien K. Fisher, Franky Lam, Raymond K. Wong |
| 2003 | APBC | A New Approach to Protein Structure and Function Analysis Using Semi-structured Databases. | William M. Shui, Raymond K. Wong, Stephen C. Graham, Lawrence K. Lee, W. Bret Church |
| 2003 | BIBE | A Novel Laboratory ersion Management System for Tracking Complex Biological Experiments. | William M. Shui, Nicole Lam, Raymond K. Wong |
| 2003 | BIBE | Application of XML Schema and Active Rules System in Management and Integration of Heterogeneous Biological Data. | William M. Shui, Raymond K. Wong |
| 2003 | CIKM | Efficient ordering for XML data. | Damien K. Fisher, Franky Lam, William M. Shui, Raymond K. Wong |
| 2003 | DASFAA | Integrating, Managing and Analyzing Protein Structures with XML Databases. | William M. Shui, Raymond K. Wong, Stephen C. Graham, Lawrence K. Lee, W. Bret Church |
| 2001 | BIBE | Utilizing Multiple Bioinformatics Information Sources: An XML Database Approach. | Raymond K. Wong, William M. Shui |
| 2000 | BIBE | An XML Repository for Molecular Sequence Data. | Raymond K. Wong, Franky Lam, Stephen C. Graham, William M. Shui |