| 2025 | ADMA | TriLinear: Time Series Anomaly Detection Using Tricube Smoothing Decomposition and a Linear Forecasting Model. | Thanapol Phungtua-Eng, Noriaki Arima, Yoshitaka Yamamoto |
| 2023 | SAC | Elastic Data Binning for Transient Pattern Analysis in Time-Domain Astrophysics. | Thanapol Phungtua-Eng, Yoshitaka Yamamoto, Shigeyuki Sako |
| 2016 | EDBT | An On-Line Approximation Algorithm for Mining Frequent Closed Itemsets Based on Incremental Intersection. | Koji Iwanuma, Yoshitaka Yamamoto, Shoshi Fukuda |
| 2015 | ILP | Completing signaling networks by abductive reasoning with perturbation experiments. | Adrien Rougny, Yoshitaka Yamamoto, Hidetomo Nabeshima, Gauvain Bourgne, Anne Poupon, Katsumi Inoue, Christine Froidevaux |
| 2014 | SIGMOD | Resource-oriented approximation for frequent itemset mining from bursty data streams. | Yoshitaka Yamamoto, Koji Iwanuma, Shoshi Fukuda |
| 2012 | ILP | Heuristic Inverse Subsumption in Full-Clausal Theories. | Yoshitaka Yamamoto, Katsumi Inoue, Koji Iwanuma |
| 2012 | ILP | Non-monotone Dualization via Monotone Dualization. | Yoshitaka Yamamoto, Koji Iwanuma, Katsumi Inoue |
| 2011 | ILP | Comparison of Upward and Downward Generalizations in CF-Induction. | Yoshitaka Yamamoto, Katsumi Inoue, Koji Iwanuma |
| 2009 | AINA | Abductive Reasoning in Cancer Therapy. | Yoshitaka Yamamoto, Katsumi Inoue, Andrei Doncescu |
| 2008 | AINA | Estimation of Possible Reaction States in Metabolic Pathways Using Inductive Logic Programming. | Yoshitaka Yamamoto, Katsumi Inoue, Andrei Doncescu |
| 2007 | AINA | Biological Systems Analysis Using Inductive Logic Programming. | Andrei Doncescu, Yoshitaka Yamamoto, Katsumi Inoue |