| 2025 | MICCAI | MoDiff: A Morphology-Emphasized Diffusion Model for Ambiguous Medical Image Segmentation. | Jung Su Ahn, Ki Hoon Kwak, Jung Woo Seo, Young-Rae Cho |
| 2012 | CIBCB | Assessing reliability of protein-protein interactions by gene ontology integration. | George D. Montaez, Young-Rae Cho |
| 2011 | ICDM | Entropy-Based Graph Clustering: Application to Biological and Social Networks. | Edward Casey Kenley, Young-Rae Cho |
| 2010 | BIBE | Functional Flow Simulation Based Analysis of Protein Interaction Network. | Lei Shi, Young-Rae Cho, Aidong Zhang |
| 2009 | ICDM | Mining of Attribute Interactions Using Information Theoretic Metrics. | Pritam Chanda, Young-Rae Cho, Aidong Zhang, Murali Ramanathan |
| 2009 | ICDM | flowNet: Flow-Based Approach for Efficient Analysis of Complex Biological Networks. | Young-Rae Cho, Lei Shi, Aidong Zhang |
| 2008 | ASPDAC | A fast two-pass HDL simulation with on-demand dump. | Kyuho Shim, Young-Rae Cho, Namdo Kim, Hyuncheol Baik, Kyungkuk Kim, Dusung Kim, Jaebum Kim, Byeongun Min, Kyumyung Choi, Maciej J. Ciesielski, Seiyang Yang |
| 2007 | BIBE | Optimizing Flow-based Modularization by Iterative Centroid Search in Protein Interaction Networks. | Young-Rae Cho, Woochang Hwang, Aidong Zhang |
| 2007 | BIBE | SIGN: reliable protein interaction identification by integrating the Similarity In GO and the similarity in protein interaction Networks. | Woochang Hwang, Taehyong Kim, Young-Rae Cho, Aidong Zhang, Murali Ramanathan |
| 2007 | CIBCB | Modularization of Protein Interaction Networks by Incorporating Gene Ontology Annotations. | Young-Rae Cho, Woochang Hwang, Aidong Zhang |
| 2007 | ICDM | Assessing Reliability of Protein-Protein Interactions by Semantic Data Integration. | Young-Rae Cho, Woochang Hwang, Aidong Zhang |
| 2007 | ICMLA | Feature Extraction from Microarray Expression Data by Integration of Semantic Knowledge. | Young-Rae Cho, Xian Xu, Woochang Hwang, Aidong Zhang |
| 2006 | BIBE | Efficient Modularization of Weighted Protein Interaction Networks using k-Hop Graph Reduction. | Young-Rae Cho, Woochang Hwang, Aidong Zhang |
| 2006 | ICDM | Identification of Overlapping Functional Modules in Protein Interaction Networks: Information Flow-based Approach. | Young-Rae Cho, Woochang Hwang, Aidong Zhang |