| 2026 | ACL | ProtoCycle: Reflective Tool-Augmented Planning for Text-Guided Protein Design. | Yutang Ge, Guojiang Zhao, Sihang Li, Zheng Cheng, Zifeng Zhao, Hanchen Xia, Guolin Ke, Linfeng Zhang, Zhifeng Gao, Yu Guang Wang |
| 2024 | AIME | ProteinEngine: Empower LLM with Domain Knowledge for Protein Engineering. | Yiqing Shen, Outongyi Lv, Houying Zhu, Yu Guang Wang |
| 2024 | ICML | How Universal Polynomial Bases Enhance Spectral Graph Neural Networks: Heterophily, Over-smoothing, and Over-squashing. | Keke Huang, Yu Guang Wang, Ming Li, Pietro Lio |
| 2023 | CVPR | EqMotion: Equivariant Multi-Agent Motion Prediction with Invariant Interaction Reasoning. | Chenxin Xu, Robby T. Tan, Yuhong Tan, Siheng Chen, Yu Guang Wang, Xinchao Wang, Yanfeng Wang |
| 2023 | ICLR | ACMP: Allen-Cahn Message Passing with Attractive and Repulsive Forces for Graph Neural Networks. | Yuelin Wang, Kai Yi, Xinliang Liu, Yu Guang Wang, Shi Jin |
| 2023 | ICML | How Powerful are Shallow Neural Networks with Bandlimited Random Weights? | Ming Li, Sho Sonoda, Feilong Cao, Yu Guang Wang, Jiye Liang |
| 2020 | IJCNN | Deep Learning Based Unsupervised and Semi-supervised Classification for Keratoconus. | Nicole Hallett, Kai Yi, Josef Dick, Christopher Hodge, Gerard Sutton, Yu Guang Wang, Jingjing You |
| 2020 | IJCNN | Cosmo VAE: Variational Autoencoder for CMB Image Inpainting. | Kai Yi, Yi Guo, Yanan Fan, Jan Hamann, Yu Guang Wang |