| 2026 | AAAI | Targeted Pathway Inference for Biological Knowledge Bases via Graph Learning and Explanation. | Rikuto Kotoge, Ziwei Yang, Zheng Chen, Yushun Dong, Yasuko Matsubara, Jimeng Sun, Yasushi Sakurai |
| 2026 | AAAI | Query-Efficient Domain Knowledge Stealing Against Large Language Models. | Zhengao Li, Xiaopeng Yuan, Bolin Shen, Kien Le, Haohan Wang, Xugui Zhou, Shangqian Gao, Yushun Dong |
| 2026 | ACL | Topology Matters: Measuring Memory Leakage in Multi-Agent LLMs. | Jinbo Liu, Defu Cao, Yifei Wei, Tianyao Su, Yuan Liang, Yushun Dong, Yan Liu, Yue Zhao, Xiyang Hu |
| 2026 | KDD | Certified Defense on the Fairness of Graph Neural Networks. | Yushun Dong, Binchi Zhang, Hanghang Tong, Jundong Li |
| 2026 | WSDM | MolEdit: Knowledge Editing for Multimodal Molecule Language Models. | Zhenyu Lei, Patrick Soga, Yaochen Zhu, Yinhan He, Yushun Dong, Jundong Li |
| 2025 | AAAI | ST-FiT: Inductive Spatial-Temporal Forecasting with Limited Training Data. | Zhenyu Lei, Yushun Dong, Jundong Li, Chen Chen |
| 2025 | AAAI | BrainMAP: Learning Multiple Activation Pathways in Brain Networks. | Song Wang, Zhenyu Lei, Zhen Tan, Jiaqi Ding, Xinyu Zhao, Yushun Dong, Guorong Wu, Tianlong Chen, Chen Chen, Aiying Zhang, Jundong Li |
| 2025 | ACL | Harnessing Large Language Models for Disaster Management: A Survey. | Zhenyu Lei, Yushun Dong, Weiyu Li, Rong Ding, Qi R. Wang, Jundong Li |
| 2025 | EMNLP | Learning from Diverse Reasoning Paths with Routing and Collaboration. | Zhenyu Lei, Zhen Tan, Song Wang, Yaochen Zhu, Zihan Chen, Yushun Dong, Jundong Li |
| 2025 | ICDM | Navigating Between Explainability and Extractability in Machine Learning as a Service. | Ojas Nimase, Yue Zhao, Yushun Dong |
| 2025 | ICLR | Graph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspective. | Yushun Dong, Patrick Soga, Yinhan He, Song Wang, Jundong Li |
| 2025 | ICLR | CEB: Compositional Evaluation Benchmark for Fairness in Large Language Models. | Song Wang, Peng Wang, Tong Zhou, Yushun Dong, Zhen Tan, Jundong Li |
| 2025 | ICML | Towards Global-level Mechanistic Interpretability: A Perspective of Modular Circuits of Large Language Models. | Yinhan He, Wendy Zheng, Yushun Dong, Yaochen Zhu, Chen Chen, Jundong Li |
| 2025 | ICML | CEGA: A Cost-Effective Approach for Graph-Based Model Extraction and Acquisition. | Zebin Wang, Menghan Lin, Bolin Shen, Ken Anderson, Molei Liu, Tianxi Cai, Yushun Dong |
| 2025 | IJCNLP | LLM-Empowered Patient-Provider Communication: A Data-Centric Survey From a Clinical Perspective. | Ruosi Shao, Md Shamim Seraj, Kangyi Zhao, Yingtao Luo, Lincan Li, Bolin Shen, Averi Bates, Yue Zhao, Chongle Pan, Lisa Hightow-Weidman, Shayok Chakraborty, Yushun Dong |
| 2025 | KDD | ATOM: A Framework of Detecting Query-Based Model Extraction Attacks for Graph Neural Networks. | Zhan Cheng, Bolin Shen, Tianming Sha, Yuan Gao, Shibo Li, Yushun Dong |
| 2025 | KDD | Fairness-Aware Graph Learning: A Benchmark. | Yushun Dong, Song Wang, Zhenyu Lei, Zaiyi Zheng, Jing Ma, Chen Chen, Jundong Li |
| 2025 | KDD | A Survey on Model Extraction Attacks and Defenses for Large Language Models. | Kaixiang Zhao, Lincan Li, Kaize Ding, Neil Zhenqiang Gong, Yue Zhao, Yushun Dong |
| 2025 | WWW | PyOD 2: A Python Library for Outlier Detection with LLM-powered Model Selection. | Sihan Chen, Zhuangzhuang Qian, Wingchun Siu, Xingcan Hu, Jiaqi Li, Shawn Li, Yuehan Qin, Tiankai Yang, Zhuo Xiao, Wanghao Ye, Yichi Zhang, Yushun Dong, Yue Zhao |
| 2024 | ACL | Knowledge Graph-Enhanced Large Language Models via Path Selection. | Haochen Liu, Song Wang, Yaochen Zhu, Yushun Dong, Jundong Li |
| 2024 | EMNLP | Explaining Graph Neural Networks with Large Language Models: A Counterfactual Perspective on Molecule Graphs. | Yinhan He, Zaiyi Zheng, Patrick Soga, Yaochen Zhu, Yushun Dong, Jundong Li |
| 2024 | ICLR | Adversarial Attacks on Fairness of Graph Neural Networks. | Binchi Zhang, Yushun Dong, Chen Chen, Yada Zhu, Minnan Luo, Jundong Li |
| 2024 | ICML | Towards Certified Unlearning for Deep Neural Networks. | Binchi Zhang, Yushun Dong, Tianhao Wang, Jundong Li |
| 2024 | KDD | IDEA: A Flexible Framework of Certified Unlearning for Graph Neural Networks. | Yushun Dong, Binchi Zhang, Zhenyu Lei, Na Zou, Jundong Li |
| 2024 | KDD | Rethinking Fair Graph Neural Networks from Re-balancing. | Zhixun Li, Yushun Dong, Qiang Liu, Jeffrey Xu Yu |
| 2024 | PAKDD | SD-Attack: Targeted Spectral Attacks on Graphs. | Xianren Zhang, Jing Ma, Yushun Dong, Chen Chen, Min Gao, Jundong Li |
| 2024 | WWW | PyGDebias: A Python Library for Debiasing in Graph Learning. | Yushun Dong, Zhenyu Lei, Zaiyi Zheng, Song Wang, Jing Ma, Alex Jing Huang, Chen Chen, Jundong Li |
| 2023 | AAAI | Interpreting Unfairness in Graph Neural Networks via Training Node Attribution. | Yushun Dong, Song Wang, Jing Ma, Ninghao Liu, Jundong Li |
| 2023 | CIKM | GiGaMAE: Generalizable Graph Masked Autoencoder via Collaborative Latent Space Reconstruction. | Yucheng Shi, Yushun Dong, Qiaoyu Tan, Jundong Li, Ninghao Liu |
| 2023 | KDD | Fairness in Graph Machine Learning: Recent Advances and Future Prospectives. | Yushun Dong, Oyku Deniz Kose, Yanning Shen, Jundong Li |
| 2023 | KDD | Empower Post-hoc Graph Explanations with Information Bottleneck: A Pre-training and Fine-tuning Perspective. | Jihong Wang, Minnan Luo, Jundong Li, Yun Lin, Yushun Dong, Jin Song Dong, Qinghua Zheng |
| 2023 | SIGIR | When Newer is Not Better: Does Deep Learning Really Benefit Recommendation From Implicit Feedback? | Yushun Dong, Jundong Li, Tobias Schnabel |
| 2023 | WSDM | Few-shot Node Classification with Extremely Weak Supervision. | Song Wang, Yushun Dong, Kaize Ding, Chen Chen, Jundong Li |
| 2023 | SDM | RELIANT: Fair Knowledge Distillation for Graph Neural Networks. | Yushun Dong, Binchi Zhang, Yiling Yuan, Na Zou, Qi Wang, Jundong Li |
| 2022 | IJCAI | FAITH: Few-Shot Graph Classification with Hierarchical Task Graphs. | Song Wang, Yushun Dong, Xiao Huang, Chen Chen, Jundong Li |
| 2022 | KDD | On Structural Explanation of Bias in Graph Neural Networks. | Yushun Dong, Song Wang, Yu Wang, Tyler Derr, Jundong Li |
| 2022 | KDD | GUIDE: Group Equality Informed Individual Fairness in Graph Neural Networks. | Weihao Song, Yushun Dong, Ninghao Liu, Jundong Li |
| 2022 | KDD | Improving Fairness in Graph Neural Networks via Mitigating Sensitive Attribute Leakage. | Yu Wang, Yuying Zhao, Yushun Dong, Huiyuan Chen, Jundong Li, Tyler Derr |
| 2022 | PAKDD | Contrastive Attributed Network Anomaly Detection with Data Augmentation. | Zhiming Xu, Xiao Huang, Yue Zhao, Yushun Dong, Jundong Li |
| 2022 | WWW | EDITS: Modeling and Mitigating Data Bias for Graph Neural Networks. | Yushun Dong, Ninghao Liu, Brian Jalaian, Jundong Li |
| 2022 | WWW | Assessing the Causal Impact of COVID-19 Related Policies on Outbreak Dynamics: A Case Study in the US. | Jing Ma, Yushun Dong, Zheng Huang, Daniel Mietchen, Jundong Li |
| 2022 | SIGIR | Empowering Next POI Recommendation with Multi-Relational Modeling. | Zheng Huang, Jing Ma, Yushun Dong, Natasha Zhang Foutz, Jundong Li |
| 2021 | CIKM | AdaGNN: Graph Neural Networks with Adaptive Frequency Response Filter. | Yushun Dong, Kaize Ding, Brian Jalaian, Shuiwang Ji, Jundong Li |
| 2021 | KDD | Individual Fairness for Graph Neural Networks: A Ranking based Approach. | Yushun Dong, Jian Kang, Hanghang Tong, Jundong Li |
| 2019 | CIKM | Forecasting Pavement Performance with a Feature Fusion LSTM-BPNN Model. | Yushun Dong, Yingxia Shao, Xiaotong Li, Sili Li, Lei Quan, Wei Zhang, Junping Du |