| 2026 | ACL | SciCustom: A Framework for Custom Evaluation of Scientific Capabilities in Large Language Models. | Yiyang Gu, Junwei Yang, Junyu Luo, Ye Yuan, Bin Feng, Yingce Xia, Shufang Xie, Kaili Liu, Bohan Wu, Qi Shi, Haoran Li, Beier Xiao, Zhiping Xiao, Xiao Luo, Weizhi Zhang, Philip S. Yu, Zequn Liu, Ming Zhang |
| 2026 | ACL | CoPA: Benchmarking Personalized Question Answering with Data-Informed Cognitive Factors. | Hang Su, Zequn Liu, Chen Hu, Xuesong Lu, Yingce Xia, Liu Zhen |
| 2026 | SIGIR | EviRAG: Evidence-Guided Retrieval-Augmented Generation for Medical Vision-Language Models. | Yiyang Gu, Jiayue Fan, Kaili Liu, Bohan Wu, Binqi Chen, Zequn Liu, Zhiping Xiao, Rong-Cheng Tu, Xiao Luo, Ming Zhang |
| 2025 | ICLR | SMI-Editor: Edit-based SMILES Language Model with Fragment-level Supervision. | Kangjie Zheng, Siyue Liang, Junwei Yang, Bin Feng, Zequn Liu, Wei Ju, Zhiping Xiao, Ming Zhang |
| 2025 | ICML | ExLM: Rethinking the Impact of [MASK] Tokens in Masked Language Models. | Kangjie Zheng, Junwei Yang, Siyue Liang, Bin Feng, Zequn Liu, Wei Ju, Zhiping Xiao, Ming Zhang |
| 2024 | HCI | Cross-Cultural Perspectives on Artificial Intelligence Generated Content (AIGC): A Comparative Study of Attitudes and Acceptance Among Global Products. | Zequn Liu, Zhe Chen |
| 2023 | ACL | MolXPT: Wrapping Molecules with Text for Generative Pre-training. | Zequn Liu, Wei Zhang, Yingce Xia, Lijun Wu, Shufang Xie, Tao Qin, Ming Zhang, Tie-Yan Liu |
| 2022 | EMNLP | MetaFill: Text Infilling for Meta-Path Generation on Heterogeneous Information Networks. | Zequn Liu, Kefei Duan, Junwei Yang, Hanwen Xu, Ming Zhang, Sheng Wang |
| 2022 | NAACL | Pathway2Text: Dataset and Method for Biomedical Pathway Description Generation. | Junwei Yang, Zequn Liu, Ming Zhang, Sheng Wang |
| 2021 | EMNLP | Graphine: A Dataset for Graph-aware Terminology Definition Generation. | Zequn Liu, Shukai Wang, Yiyang Gu, Ruiyi Zhang, Ming Zhang, Sheng Wang |
| 2020 | ACL | Learning to Customize Model Structures for Few-shot Dialogue Generation Tasks. | Yiping Song, Zequn Liu, Wei Bi, Rui Yan, Ming Zhang |
| 2020 | AMIA | Multi-task Learning via Adaptation to Similar Tasks for Mortality Prediction of Diverse Rare Diseases. | Luchen Liu, Zequn Liu, Haoxian Wu, Zichang Wang, Jianhao Shen, Yiping Song, Ming Zhang |