| 2026 | LREC | Identifying Imaging Follow-Up in Radiology Reports: A Comparative Analysis of Traditional ML and LLM Approaches. | Namu Park, Giridhar Kaushik Ramachandran, Kevin Lybarger, Fei Xia, zlem Uzuner, Martin L. Gunn, Meliha Yetisgen |
| 2026 | LREC | Mental Health Disorder Detection beyond Social Media: A Systematic Review of Available Datasets. | Sadiya Sayara Chowdhury Puspo, Ana-Maria Bucur, Stevie Chancellor, zlem Uzuner, Marcos Zampieri |
| 2025 | ACL | Spurious Correlations and Beyond: Understanding and Mitigating Shortcut Learning in SDOH Extraction with Large Language Models. | Fardin Ahsan Sakib, Ziwei Zhu, Karen Trister Grace, Meliha Yetisgen, zlem Uzuner |
| 2025 | COLING | Leveraging Machine-Generated Data for Joint Intent Detection and Slot Filling in Bangla: A Resource-Efficient Approach. | A. H. M. Rezaul Karim, zlem Uzuner |
| 2025 | NAACL | Does Data Contamination Detection Work (Well) for LLMs? A Survey and Evaluation on Detection Assumptions. | Yujuan Fu, zlem Uzuner, Meliha Yetisgen, Fei Xia |
| 2024 | COLING | Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods. | Yujuan Fu, Giridhar Kaushik Ramachandran, Nicholas J. Dobbins, Namu Park, Michael Leu, Abby R. Rosenberg, Kevin Lybarger, Fei Xia, zlem Uzuner, Meliha Yetisgen |
| 2024 | COLING | A Novel Corpus of Annotated Medical Imaging Reports and Information Extraction Results Using BERT-based Language Models. | Namu Park, Kevin Lybarger, Giridhar Kaushik Ramachandran, Spencer Lewis, Aashka Damani, zlem Uzuner, Martin L. Gunn, Meliha Yetisgen |
| 2022 | AMIA | A Corpus of Radiology Reports From Multiple Imaging Modalities With Fine-grained Event-based Annotations. | Kevin Lybarger, Namu Park, Sitong Zhou, Aashka Damani, Alison Brennan, Jagjeet Gill, Nianiella Dorvall, Vy Huynh, Spencer Lewis, Martin L. Gunn, zlem Uzuner, Meliha Yetisgen |
| 2021 | AMIA | A New Corpus for Clinical Findings in Radiology Reports. | Wilson Lau, David Wayne, Spencer Lewis, zlem Uzuner, Martin L. Gunn, Meliha Yetisgen |
| 2021 | ICANN | Detecting Scarce Emotions Using BERT and Hyperparameter Optimization. | Zahra Rajabi, zlem Uzuner, Amarda Shehu |
| 2021 | SDM | Scalable Graph Synthesis with Adj and 1 - Adj. | Jinsung Jeon, Jing Liu, Jayoung Kim, Jaehoon Lee, Noseong Park, Jamie Jooyeon Lee, zlem Uzuner, Sushil Jajodia |
| 2020 | AMIA | Jointly Learning Clinical Entities and Relations with Contextual Language Models and Explicit Context. | Paul Barry, Sam Henry, Meliha Yetisgen, Bridget T. McInnes, zlem Uzuner |
| 2020 | AMIA | Medical Concept Normalization via Description Prediction. | Kahyun Lee, Sam Henry, zlem Uzuner |
| 2020 | AMIA | A Novel Corpus With Detailed Annotations of Social Determinants of Health. | Kevin Lybarger, Elizabeth Chang, Kylie Kerker, Jolie Shen, Erica Qiao, zlem Uzuner, Mari Ostendorf, Meliha Yetisgen |
| 2020 | ICDM | Deep Contextualized Word Embedding for Text-based Online User Profiling to Detect Social Bots on Twitter. | Maryam Heidari, James H. Jones, zlem Uzuner |
| 2019 | AMIA | Automatic Identification of Social Determinants of Health from Clinical Records. | Kevin Lybarger, Mari Ostendorf, zlem Uzuner, Meliha Yetisgen |
| 2019 | AMIA | Clinical Text Mining in Mental Health. | Jessica D. Tenenbaum, Ramakanth Kavuluru, Thomas H. McCoy, zlem Uzuner, Sumithra Velupillai |
| 2018 | AMIA | Precision Medicine: matching cancer patients with clinical trials. | Michele Filannino, Kahyun Lee, Di Jin, Kevin Buchan, William Boag, zlem Uzuner |
| 2018 | AMIA | Precision Medicine: matching cancer patients with relevant treatments. | Kahyun Lee, Michele Filannino, Di Jin, Kevin Buchan, William Boag, zlem Uzuner |
| 2018 | AMIA | FABLE: A Semi-Supervised Prescription Information Extraction System. | Carson Tao, Michele Filannino, zlem Uzuner |
| 2018 | AMIA | Extracting ADRs from Drug Labels using Bi-LSTM and CRFs. | Carson Tao, Michele Filannino, zlem Uzuner |
| 2016 | AMIA | Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'. | Stphane M. Meystre, Hongfang Liu, Rong Xu, Sivaram Arabandi, Kavishwar B. Wagholikar, Jon D. Patrick, Guergana K. Savova, Chunhua Weng, Pierre Zweigenbaum, Dina Demner-Fushman, zlem Uzuner, Hua Xu |
| 2015 | AMIA | State of the Art of Clinical Narrative Report De-Identification and Its Future. | zlem Uzuner, John S. Aberdeen, Stphane M. Meystre, Mehmet Kayaalp |
| 2014 | COLING | Biomedical/Clinical NLP. | zlem Uzuner, Meliha Yetisgen, Amber Stubbs |
| 2012 | AMIA | Using UMLS for Word Sense Disambiguation in Clinical Notes. | Anna Rumshisky, Rachel Chasin, zlem Uzuner, Peter Szolovits |
| 2012 | AMIA | Evaluation and Visualization of Human Annotator Learning Patterns. | Ying Suo, Shuying Shen, Scott L. DuVall, zlem Uzuner, Brett R. South |
| 2012 | ICIS | Supporters in Deed - Studying Online Support Provision from the Perspective of Social Capital. | Kuang-Yuan Huang, InduShobha N. Chengalur-Smith, zlem Uzuner, Priya Nambisan, Namjoo Choi |
| 2010 | ACL | Does negation really matter? | Ira Goldstein, zlem Uzuner |
| 2010 | ICIS | Informational Support or Emotional Support: Preliminary Study of an Automated Approach to Analyze Online Support Community Contents. | Kuang-Yuan Huang, Priya Nambisan, zlem Uzuner |
| 2008 | AMIA | Two Approaches to Assertion Classification. | zlem Uzuner, Xiaoran Zhang, Tawanda C. Sibanda |
| 2007 | AMIA | Three Approaches to Automatic Assignment of ICD-9-CM Codes to Radiology Reports. | Ira Goldstein, Anna Arzumtsyan, zlem Uzuner |
| 2006 | AMIA | Syntactically-Informed Semantic Category Recognizer for Discharge Summaries. | Tawanda C. Sibanda, Tian He, Peter Szolovits, zlem Uzuner |
| 2006 | NAACL | Role of Local Context in Automatic Deidentification of Ungrammatical, Fragmented Text. | Tawanda C. Sibanda, zlem Uzuner |
| 2005 | AAAI | Capturing Expression Using Linguistic Information. | zlem Uzuner, Boris Katz |
| 2005 | IJCNLP | Lexical Chains and Sliding Locality Windows in Content-based Text Similarity Detection. | Thade Nahnsen, zlem Uzuner, Boris Katz |
| 2005 | IJCNLP | A Comparative Study of Language Models for Book and Author Recognition. | zlem Uzuner, Boris Katz |
| 1999 | AAAI | Word Sense Disambiguation for Information Retrieval. | zlem Uzuner, Boris Katz, Deniz Yuret |