| 2003 | AMIA | Developing a Metadata Data Model for the National Health and Nutrition Examination Survey (NHANES). | Lewis E. Berman, Allan L. Fisher, Leighton Evans, Timothy Tilert |
| 2001 | AMIA | Quality Assurance (QC)/Quality Control (QC) Processes for the National Health and Nutrition Examination Survey (NHANES). | Lewis E. Berman, Allan L. Fisher, Yechiam Ostchega, Debra S. Reed-Gillette, Edward L. Stammerjohn |
| 1995 | PPoPP | Flattening and Parallelizing Irregular, Recurrent Loop Nests. | Anwar M. Ghuloum, Allan L. Fisher |
| 1994 | ICCD | Tradeoffs in Canonical Sequential Function Representations. | Aarti Gupta, Allan L. Fisher |
| 1994 | PLDI | Parallelizing Complex Scans and Reductions. | Allan L. Fisher, Anwar M. Ghuloum |
| 1993 | CAV | Parametric Circuit Representation Using Inductive Boolean Functions. | Aarti Gupta, Allan L. Fisher |
| 1993 | ICCAD | Representation and symbolic manipulation of linearly inductive Boolean functions. | Aarti Gupta, Allan L. Fisher |
| 1992 | SIGCSE | Teaching empirical performance analysis of parallel programs. | Allan L. Fisher, Thomas R. Gross |
| 1991 | PLDI | Size and Access Inference for Data-Parallel Programs. | Siddhartha Chatterjee, Guy E. Blelloch, Allan L. Fisher |
| 1991 | SIGCSE | Teaching the programming of parallel computers. | Allan L. Fisher, Thomas R. Gross |
| 1990 | ICPP | Flexible Parallel Polygon Rendering. | Aarti Gupta, Allan L. Fisher |
| 1989 | ICCD | Verifying pipelined hardware using symbolic logic simulation. | Soumitra Bose, Allan L. Fisher |
| 1988 | ICPP | Communication and code optimization in SIMD programs. | Allan L. Fisher, Peter T. Highnam |
| 1986 | ISCA | Scan Line Array Processors for Image Computation. | Allan L. Fisher |
| 1985 | ICPP | Memory and Modularity in Systolic Array Implementations. | Allan L. Fisher |
| 1984 | ISCA | Dictionary Machines With a Small Number of Processors. | Allan L. Fisher |
| 1983 | ISCA | Synchronizing Large VLSI Processor Arrays | Allan L. Fisher, H. T. Kung |
| 1983 | ISCA | Architecture of the PSC: A Programmable Systolic Chip | Allan L. Fisher, H. T. Kung, Louis Monier, Yasunori Dohi |