| 2025 | CVPR | A Novel 3D Decoder with Weighted and Learnable Triple Attention for 3D Microscopy Image Segmentation. | Siyavash Shabani, Sahar A. Mohammed, Bahram Parvin |
| 2025 | WACV | Multi-Aperture Transformers for 3D (MAT3D) Segmentation of Clinical and Microscopic Images. | Muhammad Sohaib, Siyavash Shabani, Sahar A. Mohammed, Garrett Winkelmaier, Bahram Parvin |
| 2018 | CVPR | Multilayer Encoder-Decoder Network for 3D Nuclear Segmentation in Spheroid Models of Human Mammary Epithelial Cell Lines. | Mina Khoshdeli, Garrett Winkelmaier, Bahram Parvin |
| 2016 | MICCAI | Integrative Analysis of Cellular Morphometric Context Reveals Clinically Relevant Signatures in Lower Grade Glioma. | Ju Han, Yunfu Wang, Weidong Cai, Alexander Borowsky, Bahram Parvin, Hang Chang |
| 2015 | WACV | Classification of 3D Multicellular Organization in Phase Microscopy for High Throughput Screening of Therapeutic Targets. | Hang Chang, Bahram Parvin |
| 2014 | CVPR | Classification of Histology Sections via Multispectral Convolutional Sparse Coding. | Yin Zhou, Hang Chang, Kenneth E. Barner, Paul T. Spellman, Bahram Parvin |
| 2013 | CVPR | Classification of Tumor Histology via Morphometric Context. | Hang Chang, Alexander Borowsky, Paul T. Spellman, Bahram Parvin |
| 2013 | ICCV | Stacked Predictive Sparse Coding for Classification of Distinct Regions in Tumor Histopathology. | Hang Chang, Yin Zhou, Paul T. Spellman, Bahram Parvin |
| 2013 | MICCAI | Characterization of Tissue Histopathology via Predictive Sparse Decomposition and Spatial Pyramid Matching. | Hang Chang, Nandita Nayak, Paul T. Spellman, Bahram Parvin |
| 2009 | CVPR | Tunable tensor voting improves grouping of membrane-bound macromolecules. | Leandro A. Loss, George Bebis, Bahram Parvin |
| 2009 | ICML | Prototype vector machine for large scale semi-supervised learning. | Kai Zhang, James T. Kwok, Bahram Parvin |
| 2008 | CVPR | A Bayesian approach for image segmentation with shape priors. | Hang Chang, Qing Yang, Bahram Parvin |
| 2007 | CIBCB | Spectral Decomposition of Signaling Networks. | Bahram Parvin, Nirmalya Ghosh, Laura Heiser, Merrill Knapp, Carolyn L. Talcott, Keith Laderoute, Joe W. Gray, Paul T. Spellman |
| 2007 | ICIP | Modeling of Front Evolution with Graph Cut Optimization. | Hang Chang, Qing Yang, Manfred Auer, Bahram Parvin |
| 2006 | ISVC | Segmentation of Three Dimensional Cell Culture Models from a Single Focal Plane. | Hang Chang, Bahram Parvin |
| 2006 | ISVC | 3D Segmentation of Mammospheres for Localization Studies. | Ju Han, Hang Chang, Qing Yang, Mary Helen Barcellos-Hoff, Bahram Parvin |
| 2005 | ISVC | Geometric Approach to Segmentation and Protein Localization in Cell Cultured Assays. | S. Raman, Bahram Parvin, Christopher Maxwell, Mary Helen Barcellos-Hoff |
| 2004 | CVPR | Perceptual Organization of Radial Symmetries. | Qing Yang, Bahram Parvin |
| 2004 | ICPR | Shape Metamorphism using p-Laplacian Equation. | Ge Cong, Mehmet Esser, Bahram Parvin, George Bebis |
| 2004 | ICPR | Localization of Saliency through Iterative Voting. | Qing Yang, Bahram Parvin, Mary Helen Barcellos-Hoff |
| 2002 | ICPR | Harmonic Cut and Regularized Centroid Transform for Localization of Subcellular Structures. | Qing Yang, Bahram Parvin |
| 2002 | ICPR | High-Resolution Reconstruction of Sparse Data from Dense Low-Resolution Spatio-Temporal Data. | Qing Yang, Bahram Parvin |
| 2002 | ICPR | CHEF: Convex Hull of Elliptic Features for 3D Blob Detection. | Qing Yang, Bahram Parvin |
| 2001 | CCGRID | Declarative Flow Control for Distributed Instrumentation. | Bahram Parvin, Gerald Fontenay, John R. Taylor, Daniel E. Callahan |
| 2000 | BIBE | BioSig: A Bioinformatic System for Studying the Mechanism of Intra-Cell Signaling. | Bahram Parvin, Ge Cong, Gerald Fontenay, John R. Taylor, R. Henshal, Mary Helen Barcellos-Hoff |
| 2000 | CVPR | A New Regularized Approach for Contour Morphing. | Ge Cong, Bahram Parvin |
| 2000 | CVPR | Feature Based Visualization of Geophysical Data. | Qing Yang, Bahram Parvin |
| 2000 | ICPR | Surface Recovery from Planar Sectional Contours. | Ge Cong, Bahram Parvin |
| 2000 | ICPR | Singular Features in Sea Surface Temperature Data. | Qing Yang, Bahram Parvin, Arthur Mariano |
| 1999 | CVPR | Model Based Segmentation of Nuclei. | Ge Cong, Bahram Parvin |
| 1999 | SC | DeepView: A Channel for Distributed Microscopy and Informatics. | Bahram Parvin, John R. Taylor, Ge Cong, M. A. O'Keefe, Mary Helen Barcellos-Hoff |
| 1998 | CVPR | Shape from Equal Thickness Contours. | Ge Cong, Bahram Parvin |
| 1998 | ICPR | Shape from interference patterns. | Ge Cong, Bahram Parvin |
| 1998 | ICPR | Curve evolution for corner enhancement. | Ge Cong, Bahram Parvin |
| 1998 | WACV | Surface reconstruction from sparse fringe contours. | Ge Cong, Bahram Parvin |
| 1998 | SC | A Collaborative Framework for Distributed Microscopy. | Bahram Parvin, John R. Taylor, Ge Cong |
| 1996 | ICPR | Visual servoing for micro-manipulation. | Bahram Parvin, Daniel E. Callahan, William E. Johnston, Marcos Maestre |
| 1994 | CVPR | Tracking of tubular objects for scientific applications. | Bahram Parvin, Carrie Johnston, Marcos Maestre |
| 1993 | CVPR | Pinta: a system for visualizing the anatomical structures of the brain from MR imaging. | Bahram Parvin, William E. Johnston, D. Roselli |
| 1992 | ICRA | B-rep from unregistered multiple range images. | Bahram Parvin, Grard G. Medioni |
| 1991 | CVPR | A dynamic system for object description and correspondence. | Bahram Parvin, Grard G. Medioni |
| 1991 | ICRA | A layered network for the correspondence of 3D objects. | Bahram Parvin, Grard G. Medioni |