| 2025 | SODA | Strict Self-Assembly of Discrete Self-Similar Fractals in the abstract Tile Assembly Model. | Florent Becker, Daniel Hader, Matthew J. Patitz |
| 2024 | DNA | Simulation of the Abstract Tile Assembly Model Using Crisscross Slats. | Phillip Drake, Daniel Hader, Matthew J. Patitz |
| 2023 | DNA | Accelerating Self-Assembly of Crisscross Slat Systems. | David Doty, Hunter Fleming, Daniel Hader, Matthew J. Patitz, Lukas A. Vaughan |
| 2023 | ICALP | The Impacts of Dimensionality, Diffusion, and Directedness on Intrinsic Cross-Model Simulation in Tile-Based Self-Assembly. | Daniel Hader, Matthew J. Patitz |
| 2022 | DNA | Universal Shape Replication via Self-Assembly with Signal-Passing Tiles (Extended Abstract). | Andrew Alseth, Daniel Hader, Matthew J. Patitz |
| 2021 | DNA | Self-Replication via Tile Self-Assembly (Extended Abstract). | Andrew Alseth, Daniel Hader, Matthew J. Patitz |
| 2021 | UC | Fractal Dimension of Assemblies in the Abstract Tile Assembly Model. | Daniel Hader, Matthew J. Patitz, Scott M. Summers |
| 2020 | SODA | The Impacts of Dimensionality, Diffusion, and Directedness on Intrinsic Universality in the abstract Tile Assembly Model. | Daniel Hader, Aaron Koch, Matthew J. Patitz, Michael Sharp |
| 2019 | UC | Geometric Tiles and Powers and Limitations of Geometric Hindrance in Self-assembly. | Daniel Hader, Matthew J. Patitz |