| 2025 | CHASE | DT4PCP: A Digital Twin Framework for Personalized Care Planning Applied to Type 2 Diabetes Management. | Javad Mohammad Alizadeh, Mukesh Kumar Patel, Huanmei Wu |
| 2025 | CHASE | Pathological Complete Response Classification on HER2-Positive Breast Cancer Patients with Double-View Graph Contrastive Learning. | Dechuang Jiao, Yanqiu Shao, Xiaohan Guo, Zihan Lin, Junchao Fei, Chenguang Yang, Yuzhou Chen, Huanmei Wu |
| 2025 | PAKDD | Safety and Public Protection: Predicting and Analyzing Incidents with Large Language Model-Based Zigzag Graph Neural Networks. | Hassan A. Shafei, Yang Zhao, Christian Martin, Javad M. Alizadeh, Karin M. Eyrich-Garg, Omar Martinez, Ying Ding, Chiu C. Tan, Huanmei Wu, Yuzhou Chen |
| 2023 | WWW | International Workshop on Digital Twins for Smart Health. | Jun Deng, Ying Ding, Luke Achenie, Jinwei Liu, Shimei Pan, Sanjay Purushotham, Huanmei Wu, Qi Wang |
| 2022 | AMIA | ADE: an integrated bioinformatics web server for neurodegenerative disease exploration, omics data analysis, and drug discovery. | Jiannan Liu, Huanmei Wu, Daniel H. Robertson, Kun Huang, Jie Zhang |
| 2022 | AMIA | Enhancing an AI-Empowered Periodontal CDSS and Comparing with Traditional Perio-risk Assessment Tools. | Jay S. Patel, Kajal Patel, Hoa Vo, Jiannan Liu, Marisol Tellez, Jasim M. Albandar, Huanmei Wu |
| 2021 | AMIA | Word Embedding and Clustering for Patient-Centered Redesign of Appointment Scheduling in Ambulatory Care Settings. | Iman Mohammadi, Saeed Mehrabi, Bryce Sutton, Huanmei Wu |
| 2020 | AMIA | An Unseen Art: Writing Letters of Support and Nomination to Promote Diversity, Equity, and Inclusion in Informatics. | Tiffany I. Leung, Jessica S. Ancker, James J. Cimino, Hillary Ross, Huanmei Wu |
| 2020 | FIE | Community Partnerships for Enhanced Research Experience in Biomedical Informatics. | Huanmei Wu |
| 2016 | AMIA | An Evaluation of Activity Trackers for Monitoring Parkinson's Disease Patient Outcomes. | Josette F. Jones, Huanmei Wu, Jay S. Patel, Suranga Nath Kasthurirathne, Sunanda Mukherjee |
| 2016 | AMIA | Predictive Modeling for Appointment No-show in Community Health Centers. | Iman Mohammadi, Ayten Turkcan, Tammy Toscos, Huanmei Wu, Bradley N. Doebbeling |
| 2016 | FIE | Customizing bioinformatics graduate programs for diversified student backgrounds. | Huanmei Wu, Oindrila Raha, Jian Zhang |
| 2015 | FIE | Bioinformatics curriculum development and skill sets for bioinformaticians. | Huanmei Wu, Amrith Palani |
| 2005 | SIGMOD | Subsequence Matching on Structured Time Series Data. | Huanmei Wu, Betty Salzberg, Gregory C. Sharp, Steve B. Jiang, Hiroki Shirato, David R. Kaeli |
| 2004 | SIGMOD | Online Event-driven Subsequence Matching over Financial Data Streams. | Huanmei Wu, Betty Salzberg, Donghui Zhang |
| 2003 | SSDBM | The CenSSIS Image Database. | Huanmei Wu, Becky Norum, Judith Newmark, Betty Salzberg, Carol M. Warner, Charles DiMarzio, David R. Kaeli |