| 2016 | COCOON | Decomposing Cubic Graphs into Connected Subgraphs of Size Three. | Laurent Bulteau, Guillaume Fertin, Anthony Labarre, Romeo Rizzi, Irena Rusu |
| 2015 | ISAAC | Obtaining a Triangular Matrix by Independent Row-Column Permutations. | Guillaume Fertin, Irena Rusu, Stphane Vialette |
| 2015 | IWOCA | Algorithmic Aspects of the S-Labeling Problem. | Guillaume Fertin, Irena Rusu, Stphane Vialette |
| 2013 | WABI | A Fixed-Parameter Algorithm for Minimum Common String Partition with Few Duplications. | Laurent Bulteau, Guillaume Fertin, Christian Komusiewicz, Irena Rusu |
| 2012 | MFCS | Pancake Flipping Is Hard. | Laurent Bulteau, Guillaume Fertin, Irena Rusu |
| 2011 | COCOA | Algorithmic Aspects of Heterogeneous Biological Networks Comparison. | Guillaume Blin, Guillaume Fertin, Hafedh Mohamed-Babou, Irena Rusu, Florian Sikora, Stphane Vialette |
| 2011 | CPM | Tractability and Approximability of Maximal Strip Recovery. | Laurent Bulteau, Guillaume Fertin, Minghui Jiang, Irena Rusu |
| 2011 | ICALP | Sorting by Transpositions Is Difficult. | Laurent Bulteau, Guillaume Fertin, Irena Rusu |
| 2010 | TAMC | Revisiting the Minimum Breakpoint Linearization Problem. | Laurent Bulteau, Guillaume Fertin, Irena Rusu |
| 2009 | CPM | Statistical Properties of Factor Oracles. | Jrmie Bourdon, Irena Rusu |
| 2009 | ISAAC | Maximal Strip Recovery Problem with Gaps: Hardness and Approximation Algorithms. | Laurent Bulteau, Guillaume Fertin, Irena Rusu |
| 2008 | WALCOM | On the Approximability of Comparing Genomes with Duplicates. | Sbastien Angibaud, Guillaume Fertin, Irena Rusu |
| 2007 | RECOMB | A Pseudo-boolean Programming Approach for Computing the Breakpoint Distance Between Two Genomes with Duplicate Genes. | Sbastien Angibaud, Guillaume Fertin, Irena Rusu, Annelyse Thvenin, Stphane Vialette |
| 2006 | RECOMB | How Pseudo-boolean Programming Can Help Genome Rearrangement Distance Computation. | Sbastien Angibaud, Guillaume Fertin, Irena Rusu, Stphane Vialette |
| 2003 | WABI | Pattern Discovery Allowing Wild-Cards, Substitution Matrices, and Multiple Score Functions. | Alban Mancheron, Irena Rusu |
| 1999 | WG | Triangulated Neighbourhoods in | Igor Parfenoff, Florian Roussel, Irena Rusu |