| 2025 | ICPRAM | An Easy-to-Use System for Tracking Robotic Platforms Using Time-of-Flight Sensors in Lab Environments. | Andr Kirsch, Jan Rexilius |
| 2025 | ISMAR | Visualizing Motion Intent in Heterogeneous Multi-Robot Environments. | Malte Riechmann-Thom, Jan Rexilius |
| 2025 | VRST | Interacting Beyond Reach: Multi-Perspective Augmented Reality for Precise Virtual Border Definition in Constrained Spaces. | Malte Riechmann-Thom, Jan Rexilius |
| 2024 | ICRA | Virtual Borders in 3D: Defining a Drone's Movement Space Using Augmented Reality. | Malte Riechmann, Andr Kirsch, Matthias Koenig, Jan Rexilius |
| 2023 | ICPRAM | Metric-Based Few-Shot Learning for Pollen Grain Image Classification. | Philipp Viertel, Matthias Knig, Jan Rexilius |
| 2021 | ICMLA | PollenGAN: Synthetic Pollen Grain Image Generation for Data Augmentation. | Philipp Viertel, Matthias Knig, Jan Rexilius |
| 2009 | GI | NeuroQLab - A Software Assistant for Neurosurgical Planning and Quantitative Image Analysis. | Florian Weiler, Jan Rexilius, Jan Klein, Horst K. Hahn |
| 2006 | GI | An Application Framework for Rapid Prototyping of Clinically Applicable Software Assistants. | Jan Rexilius, Jan-Martin Kuhnigk, Horst K. Hahn, Heinz-Otto Peitgen |
| 2006 | SIGGRAPH | Brain structure visualization using spectral fiber clustering. | Jan Klein, Felix Ritter, Horst K. Hahn, Jan Rexilius, Heinz-Otto Peitgen |
| 2004 | MICCAI | How Accurate Is Brain Volumetry? A Methodological Evaluation. | Horst K. Hahn, Benot Jolly, Miriam Lee, Daniel Krastel, Jan Rexilius, Johann Drexl, Mathias Schlter, Burckhard Terwey, Heinz-Otto Peitgen |
| 2004 | MICCAI | A Framework for the Generation of Realistic Brain Tumor Phantoms and Applications. | Jan Rexilius, Horst K. Hahn, Mathias Schlter, Sven Kohle, Holger Bourquain, Joachim Bttcher, Heinz-Otto Peitgen |
| 2003 | MICCAI | Ground Truth in MS Lesion Volumetry - A Phantom Study. | Jan Rexilius, Horst K. Hahn, Holger Bourquain, Heinz-Otto Peitgen |
| 2001 | MICCAI | A Novel Nonrigid Registration Algorithm and Applications. | Jan Rexilius, Simon K. Warfield, Charles R. G. Guttmann, X. Wei, R. Benson, L. Wolfson, Martha Elizabeth Shenton, Heinz Handels, Ron Kikinis |
| 2001 | MICCAI | A Binary Entropy Measure to Assess Nonrigid Registration Algorithms. | Simon K. Warfield, Jan Rexilius, Petra S. Huppi, Terrie E. Inder, Erik G. Miller, William M. Wells III, Gary P. Zientara, Ferenc A. Jolesz, Ron Kikinis |