| 2026 | SIGCSE | Scaling Undergraduate Research in Artificial Intelligence. | Christelle Scharff, Krishna Mohan Bathula, Carmine Guida, Jonathan W. Williams, Juan Shan, Matthew Ganis, Thomas Schmidt |
| 2025 | CHASE | Knee Osteoarthritis Detection Using Bone Distances. | Clive Lewis, Tarun Ramapuram, Juan Shan |
| 2021 | ICMLA | Automated Hand Osteoarthritis Classification Using Convolutional Neural Networks. | Carmine Guida, Ming Zhang, Jordan Blackadar, Zilong Yang, Jeffrey B. Driban, Jeffrey W. Duryea, Lena Schaefer, Charles B. Eaton, Timothy E. McAlindon, Juan Shan |
| 2019 | ICMLA | Knee Bone Segmentation on Three-Dimensional MRI. | Rania Almajalid, Juan Shan, Maolin Zhang, Garrett Stonis, Ming Zhang |
| 2018 | CHASE | Knee Osteoarthritis Severity Level Classification Using Whole Knee Cartilage Damage Index and ANN. | Yaodong Du, Juan Shan, Rania Almajalid, Ming Zhang |
| 2018 | ICMLA | Development of a Deep-Learning-Based Method for Breast Ultrasound Image Segmentation. | Rania Almajalid, Juan Shan, Yaodong Du, Ming Zhang |
| 2017 | BIBE | Automated Microaneurysm Detection in Fundus Images through Region Growing. | Lin Li, Juan Shan |
| 2016 | CHASE | CyberCare: A Novel Electronic Health Record Management System. | Nida Butt, Juan Shan |
| 2016 | CHASE | A Deep Learning Method for Microaneurysm Detection in Fundus Images. | Juan Shan, Lin Li |
| 2010 | ICIP | Completely automatic segmentation for breast ultrasound using multiple-domain features. | Juan Shan, Yuxuan Wang, Heng-Da Cheng |
| 2008 | ICPR | A novel automatic seed point selection algorithm for breast ultrasound images. | Juan Shan, Heng-Da Cheng, Yuxuan Wang |
| 2008 | ICPR | Detecting shadows of moving vehicles based on HMM. | Yuxuan Wang, Heng-Da Cheng, Juan Shan |
| 2007 | BIBE | Toward The Recognition Code Of Protein-DNA Recognition. | Juan Shan, Yuxuan Wang, Changhui Yan |
| 2006 | ICASSP | A Short-Term and Long-Term Learning Approach for Content-Based Image Retrieval. | Michael Wacht, Juan Shan, Xiaojun Qi |