| 2010 | CISIS | Efficient Prediction of Protein-Protein Interactions Using Sequence Information. | Mario R. Guarracino, Adriano Nebbia, Valeria Manna, Altannar Chinchuluun, Panos M. Pardalos |
| 2010 | IJCCI | Prior Knowledge in Supervised Classification Models. | Panos M. Pardalos, Mario R. Guarracino |
| 2006 | AINA | A Parallel Classification Method for Genomic and Proteomic Problems. | Mario R. Guarracino, Claudio Cifarelli, Onur Seref, Panos M. Pardalos |
| 2005 | CBMS | A Grid Enabled PSE for Medical Imaging: Experiences on MedIGrid. | Vania Boccia, Mario R. Guarracino |
| 2004 | ICCSA | Integrating Medical Imaging into a Grid Based Computing Infrastructure. | Paola Bonetto, Mario R. Guarracino, Fabrizio Inguglia |
| 2004 | ICCSA | Integrating Scientific Software Libraries in Problem Solving Environments: A Case Study with ScaLAPACK. | Luisa D'Amore, Mario R. Guarracino, Giuliano Laccetti, Almerico Murli |
| 2004 | ICALT | An Adaptable Learning Technology System for Mathematical Models. | Francesco Giannino, Mario R. Guarracino, Valeria Marina Monetti, Nunzio Romano, Gerardo Toraldo |
| 2003 | PDP | On the Parallelization of a Commercial PSE for Scientific Computing. | Luisa D'Amore, Mario R. Guarracino, Giuliano Laccetti |
| 2000 | CLUSTER | Yabat: An Administration and Monitoring Software for Beowulf Clusters. | Mario R. Guarracino, Giuliano Laccetti, Gennaro Oliva, Umberto Scafuri |
| 2000 | CLUSTER | Browsing Virtual Reality on a PC Cluster. | Mario R. Guarracino, Giuliano Laccetti, Diego Romano |
| 1995 | PDP | A parallel modified block Lanczos' algorithm for distributed memory architectures. | Mario R. Guarracino, Francesca Perla |