| 2005 | CPM | Assessing the Significance of Sets of Words. | Valentina Boeva, Julien Clment, Mireille Rgnier, Mathias Vandenbogaert |
| 2003 | BIBE | A Fast Algorithm for NA Secondary Structure Prediction Including Pseudoknots. | Fariza Tahi, Stefan Engelen, Mireille Rgnier |
| 2001 | WABI | Assessing the Statistical Significance of Overrepresented Oligonucleotides. | Alain Denise, Mireille Rgnier, Mathias Vandenbogaert |
| 2000 | CPM | Periods and Quasiperiods Characterization. | Mireille Rgnier, Laurent Mouchard |
| 1998 | RECOMB | A unified approach to word statistics. | Mireille Rgnier |
| 1993 | CPM | A Unifying Look at d-Dimensional Periodicities and Space Coverings. | Mireille Rgnier, Ladan Rostami |
| 1993 | VLDB | An Adaptive Algorithm for Incremental Evaluation of Production Rules in Databases. | Franoise Fabret, Mireille Rgnier, Eric Simon |
| 1992 | CPM | A Language Approach to String Searching Evaluation. | Mireille Rgnier |
| 1992 | ICDT | Optimizing Incremental Computation of Datalog Programs with Non-deterministic Semantics. | Franoise Fabret, Mireille Rgnier, Eric Simon |
| 1990 | SODA | Analysis of Boyer-Moore-Type String Searching Algorithms. | Ricardo A. Baeza-Yates, Gaston H. Gonnet, Mireille Rgnier |
| 1989 | MFCS | Knuth-Morris-Pratt Algorithm: An Analysis. | Mireille Rgnier |
| 1989 | WADS | Discs and Other Related Data Structures. | Fabrizio Luccio, Mireille Rgnier, Ren Schott |
| 1988 | ICDE | Trie Hashing Analysis. | Mireille Rgnier |
| 1987 | PERFORMANCE | Normal Limiting Distribution of the Size of Tries. | Philippe Jacquet, Mireille Rgnier |