| 2026 | ICCSA | Numerical Evaluation of 3-Loop "Baseball" and "Running Shirt" Feynman Diagrams Using GPU-Accelerated QMC Integration and Extrapolation, Based on Sector Decomposition. | Elise de Doncker, Hiroshi Daisaka, Tadashi Ishikawa, Kiyoshi Kato, Naohito Nakasato, Fukuko Yuasa |
| 2023 | FCCM | Accelerating 128-bit Floating-Point Matrix Multiplication on FPGAs. | Fumiya Kono, Naohito Nakasato, Maho Nakata |
| 2016 | FCCM | Parallelism for High-Performance Tsunami Simulation with FPGA: Spatial or Temporal? | Kohei Nagasu, Kentaro Sano, Fumiya Kono, Naohito Nakasato, Alexander Vazhenin, Stanislav G. Sedukhin |
| 2015 | ICCS | Application of GRAPE9-MPX for High Precision Calculation in Particle Physics and Performance Results. | Hiroshi Daisaka, Naohito Nakasato, Tadashi Ishikawa, Fukuko Yuasa |
| 2012 | SC | Performance Tuning of Matrix Multiplication in OpenCL on Different GPUs and CPUs. | Kazuya Matsumoto, Naohito Nakasato, Stanislav G. Sedukhin |
| 2011 | HPCC | Blocked All-Pairs Shortest Paths Algorithm for Hybrid CPU-GPU System. | Kazuya Matsumoto, Naohito Nakasato, Stanislav G. Sedukhin |
| 2009 | CLUSTER | A compiler for high performance computing with many-core accelerators. | Naohito Nakasato, J. Jun Jun Makino |
| 2005 | FCCM | Massively Parallel Processors Generator for Reconfigurable System. | Tsuyoshi Hamada, Naohito Nakasato |
| 2005 | FCCM | Astrophysical Hydrodynamics Simulations on a Reconfigurable System. | Naohito Nakasato, Tsuyoshi Hamada |
| 2005 | FPL | PGR: A Software Package for Reconfigurable Super-Computing. | Tsuyoshi Hamada, Naohito Nakasato |