Rob Patro
Publication record assembled from the DBLP archive of ranked conferences.
Papers indexed
15
Venues
4
Active years
2011–2025
Best venue rank
A*
Where they publish
Papers
15 indexed papers, newest first.
| Year | Venue | Title | Authors |
|---|---|---|---|
| 2025 | WABI | Fast Pseudoalignment Queries on Compressed Colored de Bruijn Graphs. | Alessio Campanelli, Giulio Ermanno Pibiri, Rob Patro |
| 2024 | RECOMB | Meta-colored Compacted de Bruijn Graphs. | Giulio Ermanno Pibiri, Jason Fan, Rob Patro |
| 2023 | RECOMB | Spectrum Preserving Tilings Enable Sparse and Modular Reference Indexing. | Jason Fan, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro |
| 2023 | WABI | Fulgor: A Fast and Compact {k-mer} Index for Large-Scale Matching and Color Queries. | Jason Fan, Noor Pratap Singh, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro |
| 2023 | WABI | Fast, Parallel, and Cache-Friendly Suffix Array Construction. | Jamshed Khan, Tobias Rubel, Laxman Dhulipala, Erin K. Molloy, Rob Patro |
| 2021 | WABI | Perplexity: Evaluating Transcript Abundance Estimation in the Absence of Ground Truth. | Jason Fan, Skylar Chan, Rob Patro |
| 2019 | RECOMB | An Efficient, Scalable and Exact Representation of High-Dimensional Color Information Enabled via de Bruijn Graph Search. | Fatemeh Almodaresi, Prashant Pandey, Michael Ferdman, Rob Johnson, Rob Patro |
| 2018 | RECOMB | Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index. | Prashant Pandey, Fatemeh Almodaresi, Michael A. Bender, Michael Ferdman, Rob Johnson, Rob Patro |
| 2017 | SIGMOD | A General-Purpose Counting Filter: Making Every Bit Count. | Prashant Pandey, Michael A. Bender, Rob Johnson, Rob Patro |
| 2017 | WABI | Rainbowfish: A Succinct Colored de Bruijn Graph Representation. | Fatemeh Almodaresi, Prashant Pandey, Rob Patro |
| 2015 | WABI | Optimizing Read Reversals for Sequence Compression - (Extended Abstract). | Zhong Sichen, Lu Zhao, Yan Liang, Mohammadzaman Zamani, Rob Patro, Rezaul Chowdhury, Esther M. Arkin, Joseph S. B. Mitchell, Steven Skiena |
| 2013 | WABI | Multiscale Identification of Topological Domains in Chromatin. | Darya Filippova, Rob Patro, Geet Duggal, Carl Kingsford |
| 2012 | KDD | The missing models: a data-driven approach for learning how networks grow. | Rob Patro, Geet Duggal, Emre Sefer, Hao Wang, Darya Filippova, Carl Kingsford |
| 2012 | WABI | Resolving Spatial Inconsistencies in Chromosome Conformation Data. | Geet Duggal, Rob Patro, Emre Sefer, Hao Wang, Darya Filippova, Samir Khuller, Carl Kingsford |
| 2011 | WABI | Parsimonious Reconstruction of Network Evolution. | Rob Patro, Emre Sefer, Justin Malin, Guillaume Marais, Saket Navlakha, Carl Kingsford |