| 2024 | INFOCOM | Flow Size Prediction with Short Time Gaps. | Seyed Morteza Hosseini, Sogand SadrHaghighi, Majid Ghaderi |
| 2019 | PACBB | Visualization of Similar Primer and Adapter Sequences in Assembled Archaeal Genomes. | Diogo Pratas, Seyed Morteza Hosseini, Armando J. Pinho |
| 2019 | PACBB | GeCo2: An Optimized Tool for Lossless Compression and Analysis of DNA Sequences. | Diogo Pratas, Seyed Morteza Hosseini, Armando J. Pinho |
| 2018 | PACBB | Compression of Amino Acid Sequences. | Diogo Pratas, Seyed Morteza Hosseini, Armando J. Pinho |
| 2017 | IBPRIA | Visualization of Distinct DNA Regions of the Modern Human Relatively to a Neanderthal Genome. | Diogo Pratas, Seyed Morteza Hosseini, Raquel M. Silva, Armando J. Pinho, Paulo Jorge S. G. Ferreira |
| 2017 | PACBB | On the Role of Inverted Repeats in DNA Sequence Similarity. | Seyed Morteza Hosseini, Diogo Pratas, Armando J. Pinho |
| 2017 | PACBB | Substitutional Tolerant Markov Models for Relative Compression of DNA Sequences. | Diogo Pratas, Seyed Morteza Hosseini, Armando J. Pinho |
| 2017 | PACBB | Cryfa: A Tool to Compact and Encrypt FASTA Files. | Diogo Pratas, Seyed Morteza Hosseini, Armando J. Pinho |