| 2022 | ICPR | Who wants to be a Click-Millionaire? On the Influence of Thumbnails and Captions. | Thomas Koller, Helmut Grabner |
| 2020 | ICAISC | Challenging Human Supremacy: Evaluating Monte Carlo Tree Search and Deep Learning for the Trick Taking Card Game Jass. | Joel Niklaus, Michele Alberti, Rolf Ingold, Markus Stolze, Thomas Koller |
| 2019 | CSEDU | A Game-centric Approach to Teaching Artificial Intelligence. | Marc Pouly, Thomas Koller, Ruedi Arnold |
| 2017 | ICAART | On using Support Vector Machines for the Detection and Quantification of Hand Eczema. | Stefan Schnrle, Marc Pouly, Tim vor der Brck, Alexander A. Navarini, Thomas Koller |
| 2016 | SAFECOMP | Security Services for Mixed-Criticality Systems Based on Networked Multi-core Chips. | Thomas Koller, Donatus Weber |
| 2014 | ECAI | Detection and Quantification of Hand Eczema by Visible Spectrum Skin Pattern Analysis. | Christoph Suter, Alexander A. Navarini, Marc Pouly, Ruedi Arnold, Florian S. Gutzwiller, Ren Meier, Thomas Koller |
| 2010 | LREC | LAT Bridge: Bridging Tools for Annotation and Exploration of Rich Linguistic Data. | Marc Kemps-Snijders, Thomas Koller, Han Sloetjes, Huib Verwey |
| 1995 | ICCV | Multiscale Detection of Curvilinear Structures in 2D and 3D Image Data. | Thomas Koller, Guido Gerig, Gbor Szkely, Daniel Dettwiler |
| 1993 | CAIP | Analysis of MR Angiography Volume Data Leading to the Structural Description of the Cerebral Vessel Tree. | Gbor Szkely, Guido Gerig, Thomas Koller, Christian Brechbhler, Olaf Kbler |