| 2009 | FCCM | FPGA Floating Point Datapath Compiler. | Martin Langhammer, Tom Van Court |
| 2008 | FPL | FPGA acceleration of quasi-Monte Carlo in finance. | Nathan A. Woods, Tom Van Court |
| 2006 | FCCM | Application-Specific Memory Interleaving Enables High Performance in FPGA-based Grid Computations. | Tom Van Court, Martin C. Herbordt |
| 2006 | FCCM | Integrating FPGA Acceleration into the Protomol Molecular Dynamics Code: Preliminary Report. | Yongfeng Gu, Tom Van Court, Martin C. Herbordt |
| 2006 | FCCM | Single Pass, BLAST-Like, Approximate String Matching on FPGAs. | Martin C. Herbordt, Josh Model, Yongfeng Gu, Bharat Sukhwani, Tom Van Court |
| 2006 | FPL | Application-Specific Memory Interleaving for FPGA-Based Grid Computations: A General Design Technique. | Tom Van Court, Martin C. Herbordt |
| 2006 | FPL | Sizing of Processing Arrays for FPGA-Based Computation. | Tom Van Court, Martin C. Herbordt |
| 2006 | FPL | Improved Interpolation and System Integration for FPGA-Based Molecular Dynamics Simulations. | Yongfeng Gu, Tom Van Court, Martin C. Herbordt |
| 2005 | FCCM | Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations. | Yongfeng Gu, Tom Van Court, Douglas DiSabello, Martin C. Herbordt |
| 2005 | FPL | LAMP: A Tool Suite for Families of FPGA-Based Application Accelerators. | Tom Van Court, Martin C. Herbordt |
| 2005 | FPL | Accelerating Molecular Dynamics Simulations With Configurable Circuits. | Yongfeng Gu, Tom Van Court, Martin C. Herbordt |
| 2004 | FCCM | FPGA Acceleration of Rigid Molecule Interactions. | Tom Van Court, Yongfeng Gu, Martin C. Herbordt |
| 2004 | FPL | Processing Repetitive Sequence Structures with Mismatches at Streaming Rate. | Albert A. Conti, Tom Van Court, Martin C. Herbordt |
| 2004 | FPL | FPGA Acceleration of Rigid Molecule Interactions. | Tom Van Court, Yongfeng Gu, Martin C. Herbordt |
| 2003 | FPL | Case Study of a Functional Genomics Application. | Tom Van Court, Martin C. Herbordt, Richard J. Barton |