| 2025 | ACL | Improve Language Model and Brain Alignment via Associative Memory. | Congchi Yin, Yongpeng Zhang, Xuyun Wen, Piji Li |
| 2025 | CIKM | BrainX: A Universal Brain Decoding Framework with Feature Disentanglement and Neuro-Geometric Representation Learning. | Zheng Cui, Dong Nie, Pengcheng Xue, Xia Wu, Daoqiang Zhang, Xuyun Wen |
| 2025 | CogSci | Improving Brain-to-Image Reconstruction via Fine-Grained Text Bridging. | Runze Xia, Shuo Feng, Renzhi Wang, Congchi Yin, Xuyun Wen, Piji Li |
| 2025 | MICCAI | SMF-Net: Unlocking Multimodal Insights for Enhanced Stroke Lesion Segmentation. | Meklit Mesfin Atlaw, Geng Chen, Haotian Jiang, Xuyun Wen, Hengfei Cui, Yong Xia |
| 2024 | MICCAI | WSSADN: A Weakly Supervised Spherical Age-Disentanglement Network for Detecting Developmental Disorders with Structural MRI. | Pengcheng Xue, Dong Nie, Meijiao Zhu, Ming Yang, Han Zhang, Daoqiang Zhang, Xuyun Wen |
| 2024 | MICCAI | TARDRL: Task-Aware Reconstruction for Dynamic Representation Learning of fMRI. | Yunxi Zhao, Dong Nie, Geng Chen, Xia Wu, Daoqiang Zhang, Xuyun Wen |
| 2023 | MICCAI | Multi-Target Domain Adaptation with Prompt Learning for Medical Image Segmentation. | Yili Lin, Dong Nie, Yuting Liu, Ming Yang, Daoqiang Zhang, Xuyun Wen |
| 2023 | MICCAI | Positive Definite Wasserstein Graph Kernel for Brain Disease Diagnosis. | Kai Ma, Xuyun Wen, Qi Zhu, Daoqiang Zhang |
| 2022 | ICONIP | Deep Domain Adaptation for EEG-Based Cross-Subject Cognitive Workload Recognition. | Yueying Zhou, Pengpai Wang, Peiliang Gong, Yanling Liu, Xuyun Wen, Xia Wu, Daoqiang Zhang |
| 2022 | MICCAI | Optimal Transport Based Ordinal Pattern Tree Kernel for Brain Disease Diagnosis. | Kai Ma, Xuyun Wen, Qi Zhu, Daoqiang Zhang |
| 2020 | MICCAI | A Computational Framework for Dissociating Development-Related from Individually Variable Flexibility in Regional Modularity Assignment in Early Infancy. | Mayssa Soussia, Xuyun Wen, Zhen Zhou, Bing Jin, Tae-Eui Kam, Li-Ming Hsu, Zhengwang Wu, Gang Li, Li Wang, Islem Rekik, Weili Lin, Dinggang Shen, Han Zhang |
| 2019 | MICCAI | A Deep Learning Framework for Noise Component Detection from Resting-State Functional MRI. | Tae-Eui Kam, Xuyun Wen, Bing Jin, Zhicheng Jiao, Li-Ming Hsu, Zhen Zhou, Yujie Liu, Koji Yamashita, Sheng-Che Hung, Weili Lin, Han Zhang, Dinggang Shen |