| 2021 | HiPC | CMAP-LAP: Configurable Massively Parallel Solver for Lattice Problems. | Nariaki Tateiwa, Yuji Shinano, Keiichiro Yamamura, Akihiro Yoshida, Shizuo Kaji, Masaya Yasuda, Katsuki Fujisawa |
| 2020 | SC | Massive parallelization for finding shortest lattice vectors based on ubiquity generator framework. | Nariaki Tateiwa, Yuji Shinano, Satoshi Nakamura, Akihiro Yoshida, Shizuo Kaji, Masaya Yasuda, Katsuki Fujisawa |
| 2019 | CPAIOR | Building Optimal Steiner Trees on Supercomputers by Using up to 43, 000 Cores. | Yuji Shinano, Daniel Rehfeldt, Thorsten Koch |
| 2008 | ICPADS | A Dynamic Load Balancing Mechanism for New ParaLEX. | Yuji Shinano, Tobias Achterberg, Tetsuya Fujie |
| 2007 | ACCV | Automatic Range Image Registration Using Mixed Integer Linear Programming. | Shizu Sakakubara, Yuusuke Kounoike, Yuji Shinano, Ikuko Shimizu |
| 2006 | EuroPar | Computing the Diameter of 17-Pancake Graph Using a PC Cluster. | Shogo Asai, Yuusuke Kounoike, Yuji Shinano, Keiichi Kaneko |
| 2004 | ICINCO | Solving the Longest Word-Chain Problem. | Nobuo Inui, Yuji Shinano, Yuusuke Kounoike, Yoshiyuki Kotani |
| 2003 | EuroPar | Effectiveness of Parallelizing the ILOG-CPLEX Mixed Integer Optimizer in the PUBB2 Framework. | Yuji Shinano, Tetsuya Fujie, Yuusuke Kounoike |
| 2003 | PDPTA | A Simulator for Message Passing Based Parallel and Distributed Programs to Evaluate the Influence of Latency of Message Transfers. | Yoshihisa Amakata, Yuji Shinano, Mario Nakamori |
| 2002 | PDPTA | Combining Imperfect Components (II) - The Case of Multidimensional Error. | Yuusaku Kamura, Mario Nakamori, Yuji Shinano |
| 2002 | PDPTA | An Algorithm of the Optimal Order of Component Mounting on an Electronic Circuit Board. | Teppei Mizuno, Yuji Shinano, Mario Nakamori |