| 2006 | ICDE | Transaction Time Support Inside a Database Engine. | David B. Lomet, Roger S. Barga, Mohamed F. Mokbel, German Shegalov, Rui Wang, Yunyue Zhu |
| 2005 | SIGMOD | Immortal DB: transaction time support for SQL server. | David B. Lomet, Roger S. Barga, Mohamed F. Mokbel, German Shegalov, Rui Wang, Yunyue Zhu |
| 2004 | SIGMOD | Fast Algorithms for Time Series with applications to Finance, Physics, Music, Biology, and other Suspects. | Alberto Lerner, Dennis E. Shasha, Zhihua Wang, Xiaojian Zhao, Yunyue Zhu |
| 2003 | KDD | Efficient elastic burst detection in data streams. | Yunyue Zhu, Dennis E. Shasha |
| 2003 | SIGMOD | IPSOFACTO: A Visual Correlation Tool for Aggregate Network Traffic Data. | Flip Korn, S. Muthukrishnan, Yunyue Zhu |
| 2003 | SIGMOD | Warping Indexes with Envelope Transforms for Query by Humming. | Yunyue Zhu, Dennis E. Shasha |
| 2003 | SIGMOD | Query by Humming - in Action with its Technology Revealed. | Yunyue Zhu, Dennis E. Shasha, Xiaojian Zhao |
| 2003 | VLDB | Checks and Balances: Monitoring Data Quality Problems in Network Traffic Databases. | Flip Korn, S. Muthukrishnan, Yunyue Zhu |
| 2002 | VLDB | StatStream: Statistical Monitoring of Thousands of Data Streams in Real Time. | Yunyue Zhu, Dennis E. Shasha |
| 1999 | ICRA | Stable Neuro-Adaptive Control for Robot with Unknown Dynamics. | Fuchun Sun, Zengqi Sun, Kab Il Kim, Yunyue Zhu, Wenjuan Lu |