Can Alkan
Publication record assembled from the DBLP archive of ranked conferences.
Papers indexed
11
Venues
7
Active years
2005–2026
Best venue rank
A*
Where they publish
Papers
11 indexed papers, newest first.
| Year | Venue | Title | Authors |
|---|---|---|---|
| 2026 | ICS | POACHA: Partial Order Alignment Computation Hardware Acceleration. | Zeynep Akcil, Berkan Sahin, Toygar Tanriverdi, Zlal Bingl, Can Alkan |
| 2026 | ICS | In-depth data movement characterization of DNA read mapping algorithms. | Berkan Sahin, Ecem Ilgn, Klea Zambaku, Can Alkan |
| 2022 | ISCA | SeGraM: a universal hardware accelerator for genomic sequence-to-graph and sequence-to-sequence mapping. | Damla Senol Cali, Konstantinos Kanellopoulos, Jol Lindegger, Zlal Bingl, Gurpreet S. Kalsi, Ziyi Zuo, Can Firtina, Meryem Banu Cavlak, Jeremie S. Kim, Nika Mansouri-Ghiasi, Gagandeep Singh, Juan Gmez-Luna, Nour Almadhoun Alserr, Mohammed Alser, Sreenivas Subramoney, Can Alkan, Saugata Ghose, Onur Mutlu |
| 2021 | WABI | BISER: Fast Characterization of Segmental Duplication Structure in Multiple Genome Assemblies. | Hamza Iseric, Can Alkan, Faraz Hach, Ibrahim Numanagic |
| 2020 | MICRO | GenASM: A High-Performance, Low-Power Approximate String Matching Acceleration Framework for Genome Sequence Analysis. | Damla Senol Cali, Gurpreet S. Kalsi, Zlal Bingl, Can Firtina, Lavanya Subramanian, Jeremie S. Kim, Rachata Ausavarungnirun, Mohammed Alser, Juan Gmez-Luna, Amirali Boroumand, Anant Nori, Allison Scibisz, Sreenivas Subramoney, Can Alkan, Saugata Ghose, Onur Mutlu |
| 2015 | ESORICS | Can you Really Anonymize the Donors of Genomic Data in Today's Digital World? | Mohammed Alser, Nour Almadhoun, Azita Nouri, Can Alkan, Erman Ayday |
| 2011 | PSB | Session Introduction. | Can Alkan, Emidio Capriotti, Eleazar Eskin, Fereydoun Hormozdiari, Maricel G. Kann |
| 2010 | PSB | Session Introduction. | Can Alkan, Michael Brudno, Evan E. Eichler, Maricel G. Kann, Sleyman Cenk Sahinalp |
| 2009 | RECOMB | Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes. | Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, Sleyman Cenk Sahinalp |
| 2006 | RECOMB | RNA Secondary Structure Prediction Via Energy Density Minimization. | Can Alkan, Emre Karako, Sleyman Cenk Sahinalp, Peter J. Unrau, H. Alexander Ebhardt, Kaizhong Zhang, Jeremy Buhler |
| 2005 | RECOMB | RNA-RNA Interaction Prediction and Antisense RNA Target Search. | Can Alkan, Emre Karako, Joseph H. Nadeau, Sleyman Cenk Sahinalp, Kaizhong Zhang |