Knut Reinert
Publication record assembled from the DBLP archive of ranked conferences.
Papers indexed
23
Venues
8
Active years
1996–2024
Best venue rank
A*
Where they publish
Papers
23 indexed papers, newest first.
| Year | Venue | Title | Authors |
|---|---|---|---|
| 2024 | EDBT | Optimizing Job/Task Granularity for Metagenomic Workflows in Heterogeneous Cluster Infrastructures. | Somayeh Mohammadi, Latif Pourkarimi, Manuel Zschbitz, Tristan Aretz, Ninon De Mecquenem, Ulf Leser, Knut Reinert |
| 2024 | RECOMB | Decoil: Reconstructing Extrachromosomal DNA Structural Heterogeneity from Long-Read Sequencing Data. | Madalina Giurgiu, Nadine Wittstruck, Elias Rodriguez-Fos, Roco Chamorro Gonzlez, Lotte Brckner, Annabell Krienelke-Szymansky, Konstantin Helmsauer, Anne Hartebrodt, Philipp Euskirchen, Richard P. Koche, Kerstin Haase, Knut Reinert, Anton G. Henssen |
| 2022 | FPGA | Co-Design for Energy Efficient and Fast Genomic Search: Interleaved Bloom Filter on FPGA. | Marius Knaust, Enrico Seiler, Knut Reinert, Thomas Steinke |
| 2017 | RECOMB | EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices. | Christopher Pockrandt, Marcel Ehrhardt, Knut Reinert |
| 2017 | WABI | Vaquita: Fast and Accurate Identification of Structural Variation Using Combined Evidence. | Jongkyu Kim, Knut Reinert |
| 2015 | RECOMB | CIDANE: Comprehensive Isoform Discovery and Abundance Estimation. | Stefan Canzar, Sandro Andreotti, David Weese, Knut Reinert, Gunnar W. Klau |
| 2013 | EDBT | Scalable string similarity search/join with approximate seeds and multiple backtracking. | Enrico Siragusa, David Weese, Knut Reinert |
| 2012 | WABI | Hidden Breakpoints in Genome Alignments. | Birte Kehr, Knut Reinert, Aaron E. Darling |
| 2008 | ECCB | Segment-based multiple sequence alignment. | Tobias Rausch, Anne-Katrin Emde, David Weese, Andreas Dring, Cdric Notredame, Knut Reinert |
| 2008 | WABI | Fast and Adaptive Variable Order Markov Chain Construction. | Marcel H. Schulz, David Weese, Tobias Rausch, Andreas Dring, Knut Reinert, Martin Vingron |
| 2007 | ISMB | A geometric approach for the alignment of liquid chromatography - mass spectrometry data. | Eva Lange, Clemens Grpl, Ole Schulz-Trieglaff, Andreas Leinenbach, Christian G. Huber, Knut Reinert |
| 2007 | RECOMB | A Fast and Accurate Algorithm for the Quantification of Peptides from Mass Spectrometry Data. | Ole Schulz-Trieglaff, Rene Hussong, Clemens Grpl, Andreas Hildebrandt, Knut Reinert |
| 2006 | PSB | High-Accuracy Peak Picking of Proteomics Data Using Wavelet Techniques. | Eva Lange, Clemens Grpl, Knut Reinert, Oliver Kohlbacher, Andreas Hildebrandt |
| 2005 | WABI | Multiple Structural RNA Alignment with Lagrangian Relaxation. | Markus Bauer, Gunnar W. Klau, Knut Reinert |
| 2004 | ISMB | Optimal robust non-unique probe selection using Integer Linear Programming. | Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert |
| 2002 | ECCB | Multiple sequence alignment with arbitrary gap costs: Computing an optimal solution using polyhedral combinatorics. | Ernst Althaus, Alberto Caprara, Hans-Peter Lenhof, Knut Reinert |
| 2002 | WABI | Segment Match Refinement and Applications. | Aaron L. Halpern, Daniel H. Huson, Knut Reinert |
| 2001 | ISMB | Design of a compartmentalized shotgun assembler for the human genome. | Daniel H. Huson, Knut Reinert, Saul A. Kravitz, Karin A. Remington, Arthur L. Delcher, Ian M. Dew, Michael Flanigan, Aaron L. Halpern, Zhongwu Lai, Clark M. Mobarry, Granger G. Sutton, Eugene W. Myers |
| 2001 | RECOMB | The greedy path-merging algorithm for sequence assembly. | Daniel H. Huson, Knut Reinert, Eugene W. Myers |
| 2001 | WABI | Comparing Assemblies Using Fragments and Mate-Pairs. | Daniel H. Huson, Aaron L. Halpern, Zhongwu Lai, Eugene W. Myers, Knut Reinert, Granger G. Sutton |
| 1998 | RECOMB | A polyhedral approach to RNA sequence structure alignment. | Hans-Peter Lenhof, Knut Reinert, Martin Vingron |
| 1997 | RECOMB | A branch-and-cut algorithm for multiple sequence alignment. | Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kurt Mehlhorn, John D. Kececioglu |
| 1996 | ICALP | Lower Bounds for Row Minima Searching (Extended Abstract). | Phillip G. Bradford, Knut Reinert |