| 2025 | ICASSP | Adapting Large Language Model for Spatio-Temporal Understanding in Next Point-of-Interest Prediction. | Qiuhan Han, Atsushi Yoshikawa, Masayuki Yamamura |
| 2025 | KSEM | Context-Aware Spatiotemporal Graph Attention Network for Next POI Recommendation. | Qiuhan Han, Qian Wang, Atsushi Yoshikawa, Masayuki Yamamura |
| 2010 | BIBE | An Accurate Prediction Method for Protein Structural Class from Signal Patterns of NMR Spectra in the Absence of Chemical Shift Assignments. | Hiromi Arai, Naoya Tochio, Tsuyoshi Kato, Takanori Kigawa, Masayuki Yamamura |
| 2009 | GECCO | Biologically-implemented genetic algorithm for protein engineering. | Hiroshi Someya, Kensaku Sakamoto, Masayuki Yamamura |
| 2008 | DNA | Experimental Validation of Signal Dependent Operation in Whiplash PCR. | Ken Komiya, Masayuki Yamamura, John A. Rose |
| 2007 | CEC | An implementation of Aqueous memory molecules with light responsive DNAs. | Masayuki Yamamura, Noriko Hirayama, Ken Komiya |
| 2007 | DNA | An Interface for a Computing Model Using Methylation to Allow Precise Population Control by Quantitative Monitoring. | Ken Komiya, Noriko Hirayama, Masayuki Yamamura |
| 2007 | DNA | A Realization of DNA Molecular Machine That Walks Autonomously by Using a Restriction Enzyme. | Hiroyuki Sekiguchi, Ken Komiya, Daisuke Kiga, Masayuki Yamamura |
| 2005 | CEC | Congestion detection and clearing history of trip time in AntNet. | Shigeo Doi, Masayuki Yamamura |
| 2004 | DNA | Toward "Wet" Implementation of Genetic Algorithm for Protein Engineering. | Kensaku Sakamoto, Masayuki Yamamura, Hiroshi Someya |
| 2004 | DNA | A Design for Cellular Evolutionary Computation by Using Bacteria. | Kenichi Wakabayashi, Masayuki Yamamura |
| 2003 | CEC | GA-based generic method for protein structure comparison. | Sung-Joon Park, Masayuki Yamamura |
| 2003 | GECCO | Real-Coded Genetic Algorithm to Reveal Biological Significant Sites of Remotely Homologous Proteins. | Sung-Joon Park, Masayuki Yamamura |
| 2003 | ICTAI | Two-Layer Protein Structure Comparison. | Sung-Joon Park, Masayuki Yamamura |
| 2002 | DNA | Cascading Whiplash PCR with a Nicking Enzyme. | Daisuke Matsuda, Masayuki Yamamura |
| 2002 | GECCO | Robust Evolutionary Algorithms With Toroidal Search Space Conversion For Function Optimization. | Hiroshi Someya, Masayuki Yamamura |
| 2002 | SRDS | Self-Organizing Formation Algorithm for Active Elements. | Kenichi Fujibayashi, Satoshi Murata, Ken Sugawara, Masayuki Yamamura |
| 2001 | CEC | Genetic algorithm with search area adaptation for the function optimization and its experimental analysis. | Hiroshi Someya, Masayuki Yamamura |
| 2001 | DNA | Aqueous Solutions of Algorithmic Problems: Emphasizing Knights on a 3 x 3. | Tom Head, Xia Chen, Matthew J. Nichols, Masayuki Yamamura, Susannah Gal |
| 2001 | DNA | A Realization of Information Gate by Using Enterococcus faecalis Pheromone System. | Kenichi Wakabayashi, Masayuki Yamamura |
| 2000 | GECCO | Where should Children be Generated by Crossover Operator on Function Optimization? | Hiroshi Someya, Masayuki Yamamura |
| 2000 | PPSN | Theoretical Analysis of Simplex Crossover for Real-Coded Genetic Algorithms. | Takahide Higuchi, Shigeyoshi Tsutsui, Masayuki Yamamura |
| 1999 | CEC | Aqueous computing: writing on molecules. | Tom Head, Masayuki Yamamura, Susannah Gal |
| 1996 | ICEC | A Genetic Algorithm for Job-Shop Scheduling Problems Using Job-Based Order Crossover. | Isao Ono, Masayuki Yamamura, Shigenobu Kobayashi |
| 1996 | ICEC | Emergent Search on Double Circle TSPs Using Subgour Exchange Crossover. | Masayuki Yamamura, Isao Ono, Shigenobu Kobayashi |
| 1995 | ICML | Reinforcement Learning by Stochastic Hill Climbing on Discounted Reward. | Hajime Kimura, Masayuki Yamamura, Shigenobu Kobayashi |
| 1994 | ICEC | An Analysis of Crossover's Effect in Genetic Algorithms. | Masayuki Yamamura, Hiroshi Satoh, Shigenobu Kobayashi |
| 1991 | IJCAI | An Augmented EBL and its Application to the Utility Problem. | Masayuki Yamamura, Shigenobu Kobayashi |