| 2026 | PERCOM | HOURS: Lightweight, Orchestrated Security for UAV Swarm Telemetry. | Mohamed El-Hadedy |
| 2025 | ISSRE | Thoth: Reliable Orchestration of Post-Quantum Secure Communication in Multi-Architecture Edge Clusters. | Mohamed El-Hadedy, Wen-Mei Hwu |
| 2025 | ISSRE | QuickCommand: A Low-Latency NLP Pipeline for Reliable UAV Telepresence. | Mohamed El-Hadedy, Wen-Mei Hwu |
| 2021 | ISSRE | SHA-3-LPHP: Hardware Acceleration of SHA-3 for Low-Power High-Performance Systems. | Yuta Akiya, Kyle Thomas Le, Megan Luong, Justin C. Wilson, Anas Salah Eddin, Valerio Formicola, Mohamed El-Hadedy |
| 2020 | ICMLA | Ensemble Hyperspectral Band Selection for Detecting Nitrogen Status in Grape Leaves. | Ryan Omidi, Ali Moghimi, Alireza Pourreza, Mohamed El-Hadedy, Anas Salah Eddin |
| 2019 | FCCM | Flexi-AES: A Highly-Parameterizable Cipher for a Wide Range of Design Constraints. | Sergiu Mosanu, Xinfei Guo, Mohamed El-Hadedy, Lorena Anghel, Mircea Stan |
| 2019 | FPL | Analysis and Optimization of I/O Cache Coherency Strategies for SoC-FPGA Device. | Seungwon Min, Sitao Huang, Mohamed El-Hadedy, Jinjun Xiong, Deming Chen, Wen-Mei Hwu |
| 2017 | FPGA | ASAP: Accelerated Short Read Alignment on Programmable Hardware (Abstract Only). | Subho S. Banerjee, Mohamed El-Hadedy, Jong Bin Lim, Daniel Chen, Zbigniew T. Kalbarczyk, Deming Chen, Ravishankar K. Iyer |
| 2017 | FPL | On accelerating pair-HMM computations in programmable hardware. | Subho S. Banerjee, Mohamed El-Hadedy, Ching Y. Tan, Zbigniew T. Kalbarczyk, Steven S. Lumetta, Ravishankar K. Iyer |
| 2016 | ICCD | Generating efficient and high-quality pseudo-random behavior on Automata Processors. | Jack Wadden, Nathan Brunelle, Ke Wang, Mohamed El-Hadedy, Gabriel Robins, Mircea Stan, Kevin Skadron |
| 2015 | ISCA | Hardware overhead analysis of programmability in ARX crypto processing. | Mohamed El-Hadedy, Kevin Skadron |
| 2011 | ICIG | An Efficient Authorship Protection Scheme for Shared Multimedia Content. | Mohamed El-Hadedy, Georgios Pitsilis, Svein J. Knapskog |