| 2026 | DATE | Scytale: A Compiler Framework for Accelerating TFHE with Circuit Bootstrapping. | Rostin Shokri, Nektarios Georgios Tsoutsos |
| 2025 | DATE | Testing Robustness of Homomorphically Encrypted Split Model LLMs. | Lars Wolfgang Folkerts, Nektarios Georgios Tsoutsos |
| 2025 | ICCD | HElix: Genome Similarity Detection in the Encrypted Domain. | Rostin Shokri, Charles Gouert, Nektarios Georgios Tsoutsos |
| 2023 | IOLTS | $\text{MP}\ell\circ \mathrm{C}$: Privacy-Preserving IP Verification Using Logic Locking and Secure Multiparty Computation. | Dimitris Mouris, Charles Gouert, Nektarios Georgios Tsoutsos |
| 2023 | NDSS | REDsec: Running Encrypted Discretized Neural Networks in Seconds. | Lars Wolfgang Folkerts, Charles Gouert, Nektarios Georgios Tsoutsos |
| 2020 | DAC | Romeo: Conversion and Evaluation of HDL Designs in the Encrypted Domain. | Charles Gouert, Nektarios Georgios Tsoutsos |
| 2020 | DAC | Pythia: Intellectual Property Verification in Zero-Knowledge. | Dimitris Mouris, Nektarios Georgios Tsoutsos |
| 2019 | ICCD | Covert Data Exfiltration Using Light and Power Channels. | Patrick Cronin, Charles Gouert, Dimitris Mouris, Nektarios Georgios Tsoutsos, Chengmo Yang |
| 2017 | ASPDAC | SGXCrypter: IP protection for portable executables using Intel's SGX technology. | Dimitrios Tychalas, Nektarios Georgios Tsoutsos, Michail Maniatakos |
| 2017 | CCS | Secure 3D Printing: Reconstructing and Validating Solid Geometries using Toolpath Reverse Engineering. | Nektarios Georgios Tsoutsos, Homer Gamil, Michail Maniatakos |
| 2017 | DAC | ObfusCADe: Obfuscating Additive Manufacturing CAD Models Against Counterfeiting: Invited. | Nikhil Gupta, Fei Chen, Nektarios Georgios Tsoutsos, Michail Maniatakos |
| 2017 | ICCD | Memory-Bounded Randomness for Hardware-Constrained Encrypted Computation. | Nektarios Georgios Tsoutsos, Oleg Mazonka, Michail Maniatakos |
| 2016 | ASPDAC | Enabling multi-layer cyber-security assessment of Industrial Control Systems through Hardware-In-The-Loop testbeds. | Anastasis Keliris, Charalambos Konstantinou, Nektarios Georgios Tsoutsos, Raghad Baiad, Michail Maniatakos |
| 2016 | ICCD | Cryptographic vote-stealing attacks against a partially homomorphic e-voting architecture. | Nektarios Georgios Tsoutsos, Michail Maniatakos |
| 2015 | ITC | Extending residue-based fault tolerance to encrypted computation. | Nektarios Georgios Tsoutsos, Michail Maniatakos |
| 2014 | DAC | Advanced Techniques for Designing Stealthy Hardware Trojans. | Nektarios Georgios Tsoutsos, Charalambos Konstantinou, Michail Maniatakos |
| 2014 | DATE | HEROIC: Homomorphically EncRypted One Instruction Computer. | Nektarios Georgios Tsoutsos, Michail Maniatakos |