| 2012 | SecureComm | Towards a Framework for Evaluating the Security of Physical-Layer Identification Systems. | Ryan M. Gerdes, Mani Mina, Thomas E. Daniels |
| 2010 | GLOBECOM | Node Behavior Based Fast Malware Detection for Enterprise Networks. | Su Chang, Thomas E. Daniels |
| 2009 | CCS | P2P botnet detection using behavior clustering & statistical tests. | Su Chang, Thomas E. Daniels |
| 2009 | ITiCSE | Xen worlds: leveraging virtualization in distance education. | Benjamin R. Anderson, Amy K. Joines, Thomas E. Daniels |
| 2008 | CCS | Reference models for network data anonymization. | Shantanu Gattani, Thomas E. Daniels |
| 2008 | ICWS | SCWIM an Integrity Model for SOA Networks. | Majd M. Al-Kofahi, Su Chang, Thomas E. Daniels |
| 2008 | SIGCSE | The role of virtualization in computing education. | Alessio Gaspar, Sarah Langevin, William D. Armitage, R. Sekar, Thomas E. Daniels |
| 2006 | IPCCC | Monitor placement for stepping stone analysis. | Yongping Tang, Yema Liverpool, Thomas E. Daniels |
| 2006 | NDSS | Device Identification via Analog Signal Fingerprinting: A Matched Filter Approach. | Ryan M. Gerdes, Thomas E. Daniels, Mani Mina, Steve Russell |
| 2006 | NSPW | Diffusion and graph spectral methods for network forensic analysis. | Wei Wang, Thomas E. Daniels |
| 2006 | TridentCom | A testbed for evaluation and analysis of stepping stone attack attribution techniques. | Jianqiang Xin, Linfeng Zhang, Brad Aswegan, John Dickerson, Julie A. Dickerson, Thomas E. Daniels, Yong Guan |
| 2005 | ACSAC | Building Evidence Graphs for Network Forensics Analysis. | Wei Wang, Thomas E. Daniels |
| 2005 | SecureComm | Short Paper: A Signal Fingerprinting Paradigm for General Physical Layer and Sensor Network Security and Assurance. | Thomas E. Daniels, Mani Mina, Steve Russell |
| 2002 | ACSAC | Digging For Worms, Fishing For Answers. | Florian P. Buchholz, Thomas E. Daniels, James P. Early, Rajeev Gopalakrishna, R. Patrick Gorman, Benjamin A. Kuperman, Sofie Nystrom, Addam Schroll, Andrew Smith |
| 2000 | ACSAC | A Network Audit System for Host-based Intrusion Detection (NASHID) in Linux. | Thomas E. Daniels, Eugene H. Spafford |
| 2000 | NSPW | Network traffic tracking systems: folly in the large? | Thomas E. Daniels, Eugene H. Spafford |