| 2008 | Structure-Approximating Design of Stable Proteins in 2D HP Model Fortified by Cysteine Monomers. | Alireza Hadj Khodabakhshi, Jn Manuch, Arash Rafiey, Arvind Gupta |
| 2008 | KEGG for Medical and Pharmaceutical Applications. | Minoru Kanehisa |
| 2008 | Image Compression-based Approach to Measuring the Similarity of Protein Structures. | Morihiro Hayashida, Tatsuya Akutsu |
| 2008 | Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress. | Yannick Haudry, Chuang Kee Ong, Laurence Ettwiller, Hugo Brub, Ivica Letunic, Misha Kapushesky, Paul-Daniel Weeber, Xi Wang, Julien Gagneur, Charles Girardot, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich |
| 2008 | Recent Progress in Phylogenetic Combinatorics. | Andreas Dress |
| 2008 | Integrating Hierarchical Controlled Vocabularies With OWL Ontology: A Case Study from the Domain of Molecular Interactions. | Melissa J. Davis, Andrew F. Newman, Imran Khan, Jane Hunter, Mark A. Ragan |
| 2008 | Primer Selection Methods for Detection of Genomic Inversions and Deletions via PAMP. | Bhaskar DasGupta, Jin Jun, Ion I. Mandoiu |
| 2008 | Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency. | Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Siu, Siu-Ming Yiu |
| 2008 | Linear Time Probabilistic Algorithms for the Singular Haplotype Reconstruction Problem from SNP Fragments. | Zhixiang Chen, Bin Fu, Robert T. Schweller, Boting Yang, Zhiyu Zhao, Binhai Zhu |
| 2008 | Preface. | Alvis Brazma, Satoru Miyano, Tatsuya Akutsu |
| 2008 | Predicting Nucleolar Proteins Using Support-Vector Machines. | Mikael Bodn |
| 2008 | A Fixed-Parameter Approach for Weighted Cluster Editing. | Sebastian Bcker, Sebastian Briesemeister, Quang Bao Anh Bui, Anke Tru |
| 2008 | Supervised Ensembles of Prediction Methods for Subcellular Localization. | Johannes Afalg, Jing Gong, Hans-Peter Kriegel, Alexey Pryakhin, Tiandi Wei, Arthur Zimek |
| 2008 | GenePC and ASPIC Integrate Gene Predictions with Expressed Sequence Alignments To Predict Alternative Transcripts. | Tyler S. Alioto, Roderic Guig, Ernesto Picardi, Graziano Pesole |
| 2008 | Alignment of Minisatellite Maps: A Minimum Spanning Tree-based Approach. | Mohamed Ibrahim Abouelhoda, Robert Giegerich, Behshad Behzadi, Jean-Marc Steyaert |
| 2007 | A New Strategy of Geometrical Biclustering for Microarray Data Analysis. | Hongya Zhao, Alan Wee-Chung Liew, Hong Yan |
| 2007 | The Distance Between Randomly Constructed Genomes. | Wei Xu |
| 2007 | An Effective Promoter Detection Method using the Adaboost Algorithm. | Xudong Xie, Shuanhu Wu, Kin-Man Lam, Hong Yan |
| 2007 | Simple and Fast Alignment of Metabolic Pathways by Exploiting Local Diversity. | Sebastian Wernicke, Florian Rasche |
| 2007 | A Global Maximum Likelihood Super-Quartet Phylogeny Method. | Pinghao Wang, Bing Bing Zhou, Monther Tarawneh, Daniel Chu, Chen Wang, Albert Y. Zomaya, Richard P. Brent |
| 2007 | Gene Regulatory Network Inference via Regression Based Topological Refinement. | Jochen Supper, Holger Frhlich, Andreas Zell |
| 2007 | Inferring Gene Regulatory Networks by Machine Learning Methods. | Jochen Supper, Holger Frhlich, Christian Spieth, Andreas Drger, Andreas Zell |
| 2007 | A Randomized Algorithm for Comparing Sets of Phylogenetic Trees. | Seung-Jin Sul, Tiffani L. Williams |
| 2007 | Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg Equilibrium, and Phase Diagrams. | Young Ju Suh, Wentian Li |
| 2007 | Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree. | Martin Stig Stissing, Christian N. S. Pedersen, Thomas Mailund, Gerth Stlting Brodal, Rolf Fagerberg |