| 2014 | Applications of Bioinformatics to Non-Coding RNAs in the Era of Next-Generation Sequencing. | Chao Cheng, Jason H. Moore, Casey S. Greene |
| 2014 | Session Introduction. | Sren Brunak, Francisco M. de la Vega, Gunnar Rtsch, Joshua M. Stuart |
| 2014 | Drug Intervention Response Predictions with Paradigm (DIRPP) Identifies Drug Resistant Cancer Cell Lines and Pathway Mechanisms of Resistance. | Douglas Brubaker, Analisa Difeo, Yanwen Chen, Taylor Pearl, Kaide Zhai, Grkan Bebek, Mark R. Chance, Jill S. Barnholtz-Sloan |
| 2014 | Challenges in Secondary Analysis of High Throughput Screening Data. | Aurora S. Blucher, Shannon K. McWeeney |
| 2014 | Extracting Significant Sample-Specific Cancer Mutations Using Their Protein Interactions. | Liviu Badea |
| 2014 | Tumor Haplotype Assembly Algorithms for Cancer Genomics. | Derek Aguiar, Wendy S. W. Wong, Sorin Istrail |
| 2013 | Drug Target Predictions Based on Heterogeneous Graph Inference. | Wenhui Wang, Sen Yang, Jing Li |
| 2013 | Detection of Protein Catalytic Sites in the Biomedical Literature. | Karin Verspoor, Andrew MacKinlay, Judith D. Cohn, Michael E. Wall |
| 2013 | Session introduction. | Oliver Stegle, Steven E. Brenner, Quaid Morris, Jennifer Listgarten |
| 2013 | MetaSeq: Privacy Preserving Meta-Analysis of Sequencing-Based Association Studies. | Angad Pal Singh, Samreen Zafer, Itsik Pe'er |
| 2013 | Protein-chemical Interaction Prediction via Kernelized Sparse Learning SVM. | Yi Shi, Xinhua Zhang, Xiaoping Liao, Guohui Lin, Dale Schuurmans |
| 2013 | Detecting Highly Differentiated Copy-Number Variants from Pooled Population Sequencing. | Daniel R. Schrider, David J. Begun, Matthew W. Hahn |
| 2013 | Epigenomic Model of Cardiac Enhancers with Application to Genome Wide Association Studies. | Avinash Das Sahu, Radhouane Aniba, Yen-Pei Christy Chang, Sridhar Hannenhalli |
| 2013 | An Analytical Comparison of Multilocus Methods Under the Multispecies Coalescent: The Three-Taxon Case. | Sbastien Roch |
| 2013 | A Novel Multi-Modal Drug Repurposing Approach for Identification of Potent ACK1 Inhibitors. | Sharangdhar S. Phatak, Shuxing Zhang |
| 2013 | Interpreting Personal Transcriptomes: Personalized Mechanism-Scale Profiling of RNA-seq Data. | Alan Perez-Rathke, Haiquan Li, Yves A. Lussier |
| 2013 | Next-Generation Analysis of Cataracts: Determining Knowledge Driven Gene-Gene Interactions Using Biofilter, and Gene-Environment Interactions Using the PhenX Toolkit. | Sarah A. Pendergrass, Shefali S. Verma, Emily Rose Holzinger, Carrie Moore, John R. Wallace, Scott M. Dudek, Wayne Huggins, Terrie E. Kitchner, Carol Waudby, Richard L. Berg, Catherine A. McCarty, Marylyn D. Ritchie |
| 2013 | Session introduction. | Luay Nakhleh, Noah A. Rosenberg, Tandy J. Warnow |
| 2013 | The Future of Genome-Based Medicine. | Quaid Morris, Steven E. Brenner, Jennifer Listgarten, Oliver Stegle |
| 2013 | Using BioBin to Explore Rare Variant Population Stratification. | Carrie Moore, John R. Wallace, Alex T. Frase, Sarah A. Pendergrass, Marylyn D. Ritchie |
| 2013 | Using DNase Digestion Data to Accurately Identify Transcription Factor Binding Sites. | Kaixuan Luo, Alexander J. Hartemink |
| 2013 | Session Introduction. | Zhiyong Lu, Pankaj Agarwal, Atul J. Butte |
| 2013 | Systematic Identification of Risk Factors for Alzheimer's Disease Through Shared Genetic Architecture and Electronic Medical Records. | Li Li, David Ruau, Rong Chen, Susan C. Weber, Atul J. Butte |
| 2013 | Maximum Likelihood Phylogenetic Reconstruction from High-Resolution Whole-Genome Data and a Tree of 68 Eukaryotes. | Yu Lin, Fei Hu, Jijun Tang, Bernard M. E. Moret |
| 2013 | The Behavior of Admixed Populations in Neighbor-Joining Inference of Population Trees. | Naama M. Kopelman, Lewi Stone, Olivier Gascuel, Noah A. Rosenberg |