| 2002 | A Thematic Analysis of the AIDS Literature. | W. John Wilbur |
| 2002 | Fast Phylogenetic Methods for the Analysis of Genome Rearrangement Data: An Empirical Study. | Li-San Wang, Robert K. Jansen, Bernard M. E. Moret, Linda A. Raubeson, Tandy J. Warnow |
| 2002 | Evidence for Sequence-Independent Evolutionary Traces in Genomics Data. | Wayne Volkmuth, N. Alexandrov |
| 2002 | Support Vector Machine Prediction of Signal Peptide Cleavage Site Using a New Class of Kernels for Strings. | Jean-Philippe Vert |
| 2002 | Human Genome Variation: Disease, Drug Response, and Clinical Phenotypes - Session Introduction. | Francisco M. de la Vega, Isaac S. Kohane, Julie A. Schneider, J. Claiborne Stephens |
| 2002 | Finding Weak Motifs in DNA Sequences. | Sing-Hoi Sze, Mikhail S. Gelfand, Pavel A. Pevzner |
| 2002 | Progress in Predicting Protein Function from Structure: Unique Features of O-Glycosidases. | Eric W. Stawiski, Yael Mandel-Gutfreund, A. C. Lowenthal, L. M. Gregoret |
| 2002 | Predicting the Sub-Cellular Location of Proteins from Text Using Support Vector Machines. | Benjamin J. Stapley, Lawrence A. Kelley, Michael J. E. Sternberg |
| 2002 | Phylogenetic Genomics and Genomic Phylogenetics - Session Introduction. | Scott Stanley, Benjamin A. Salisbury |
| 2002 | Using Evolutionary Methods to Study G-Protein Coupled Receptors. | Orkun S. Soyer, Matthew W. Dimmic, Richard R. Neubig, Richard A. Goldstein |
| 2002 | Guiding Revision of Regulatory Models with Expression Data. | Jeff Shrager, Pat Langley, Andrew Pohorille |
| 2002 | Investigating Evolutionary Lines of Least Resistance Using the Inverse Protein-Folding Problem. | J. Schonfeld, Oliver Eulenstein, Kent Vander Velden, Gavin J. P. Naylor |
| 2002 | Ab Initio Folding of Multiple-Chain Proteins. | J. A. Saunders, Kenneth D. Gibson, Harold A. Scheraga |
| 2002 | Automating Data Acquisition into Ontologies from Pharmacogenetics Relational Data Sources Using Declarative Object Definitions and XML. | Daniel L. Rubin, Micheal Hewett, Diane E. Oliver, Teri E. Klein, Russ B. Altman |
| 2002 | Improving Sequence Alignments For Intrinsically Disordered Proteins. | Predrag Radivojac, Zoran Obradovic, Celeste J. Brown, A. Keith Dunker |
| 2002 | Robust Relational Parsing Over Biomedical Literature: Extracting Inhibit Relations. | James Pustejovsky, Jos M. Castao, Jason Zhang, Maciej Kotecki, Brent Cochran |
| 2002 | A SOFM Approach to Predicting HIV Drug Resistance. | R. Brian Potter, Sorin Draghici |
| 2002 | Exploring Gene Expression Data with Class Scores. | Paul Pavlidis, Darrin P. Lewis, William Stafford Noble |
| 2002 | Pre-mRNA Secondary Structure Prediction Aids Splice Site Prediction. | Donald J. Patterson, Ken Yasuhara, Walter L. Ruzzo |
| 2002 | Vertebrate Phylogenomics: Reconciled Trees and Gene Duplications. | Roderic D. M. Page, J. A. Cotton |
| 2002 | Ontology Development for a Pharmacogenetics Knowledge Base. | Diane E. Oliver, Daniel L. Rubin, Joshua M. Stuart, Micheal Hewett, Teri E. Klein, Russ B. Altman |
| 2002 | Detecting Positively Selected Amino Acid Sites Using Posterior Predictive P-Values. | Rasmus Nielsen, John P. Huelsenbeck |
| 2002 | The Accuracy of Fast Phylogenetic Methods for Large Datasets. | Luay Nakhleh, Bernard M. E. Moret, Usman Roshan, Katherine St. John, Jerry Sun, Tandy J. Warnow |
| 2002 | EULER-PCR: Finishing Experiments for Repeat Resolution. | Zufar Mulyukov, Pavel A. Pevzner |
| 2002 | A Cellular Automata Approach to Detecting Interactions Among Single-nucleotide Polymorphisms in Complex Multifactorial Diseases. | Jason H. Moore, Lance W. Hahn |