| 2001 | Assessment and Management of Single Nucleotide Polymorphism Genotype Errors in Genetic Association. | Derek Gordon, Jrg Ott |
| 2001 | Structures, Phylogenies, and Genomes: The Integrated Study of Protein Evolution - Session Introduction. | Richard A. Goldstein, David D. Pollock, Jeffrey L. Thorne |
| 2001 | High Performance Computing for Computational Biology - Session Introduction. | Thomas E. Ferrin, Bruce A. Foster, Richard Hughey |
| 2001 | Exact Algorithms for Computing Pairwise Alignments and 3-Medians From Structure-Annotated Sequences (Extended Abstract). | Patricia A. Evans, Harold T. Wareham |
| 2001 | Analyzing Sensory Systems with the Information Distortion Function. | Alexander Dimitrov, John P. Miller |
| 2001 | Nucleotide Substitutions and the Evolution of Duplicate Genes. | John S. Conery, Michael Lynch |
| 2001 | Including Biological Literature Improves Homology Search. | Jeffrey T. Chang, Soumya Raychaudhuri, Russ B. Altman |
| 2001 | Determining Significant Fold Differences in Gene Expression Analysis. | Atul J. Butte, J. Ye, G. Niederfellner, K. Rett, H. U. Hring, M. F. White, Isaac S. Kohane |
| 2001 | Disorder and Flexibility in Protein Structure and Function - Session Introduction. | Clay Bracken, Malin M. Young, A. Keith Dunker |
| 2001 | Scaling of Accuracy in Extremely Large Phylogenetic Trees. | Olaf R. P. Bininda-Emonds, S. G. Brady, J. Kim, Michael J. Sanderson |
| 2001 | SAMIE: Statistical Algorithm for Modeling Interaction Energies. | Panayiotis V. Benos, Alan S. Lapedes, D. S. Fields, Gary D. Stormo |
| 2001 | Stress-Induced DNA Duplex Destabilization in Transcriptional Initiation. | Craig J. Benham |
| 2001 | ViewFeature: Integrated Feature Analysis and Visualization. | D. Rey Banatao, Conrad C. Huang, Patricia C. Babbitt, Russ B. Altman, Teri E. Klein |
| 2001 | DNA Structure, Protein-DNA Interactions, and DNA-Protein Expression - Session Introduction. | Pierre Baldi, Richard H. Lathrop |
| 2001 | Bioethics, Fiction Science, and the Future of Mankind - Session Introduction. | Pierre Baldi, Sren Brunak |
| 2001 | An NMR-Based Quenched Hydrogen Exchange Investigation of Model Amyloid Fibrils Formed by Cold Shock Protein A. | Andrei T. Alexandrescu |
| 1999 | Recognition Between Disordered Polypeptide Chains from Cleavage of an a/B Domain: Self- versus Non-Self-Association. | X.-M. Yang, R. E. Georgescu, J.-H. Li, W.-F. Yu, Haierhan, M. L. Tasayco |
| 1999 | Preface. | |
| 1999 | Effective Query Filtering for Fast Homology Searching. | Hugh E. Williams |
| 1999 | Modeling Regulatory Networks with Weight Matrices. | D. C. Weaver, Christopher T. Workman, Gary D. Stormo |
| 1999 | Time and Memory Efficient Algorithm for Extracting Palindromic and Repetitive Subsequences in Nucleic Acid Sequences. | Tatsuhiko Tsunoda, Masao Fukagawa, Toshihisa Takagi |
| 1999 | Extension of Refractoriness in a Model of Cardiac Defibrillation. | Natalia A. Trayanova, Felipe Aguel, Kirill B. Skouibine |
| 1999 | Topology Selection in Unrooted Molecular Phylogenetic Tree By Minimum Model-Based Complexity Method. | Hiroshi Tanaka, Fengrong Ren, Toshitsugu Okayama, Takashi Gojobori |
| 1999 | Genetic Network Analysis in Light of Massively Parallel Biological Data Acquisition. | Zoltan Szallasi |
| 1999 | Application of Knowledge Discovery to Molecular Biology: Identifying Structural Regularities in Proteins. | Shaobing Su, Diane J. Cook, Lawrence B. Holder |