| 2024 | FlAIRS | Genetic algorithm feature selection resilient to increasing amounts of data imputation. | Maryam Kebari, Annie S. Wu |
| 2024 | FlAIRS | Attention-Driven Multi-Agent Reinforcement Learning: Enhancing Decisions with Expertise-Informed Tasks. | Andre Rossi Kuroswiski, Annie S. Wu, Angelo Passaro |
| 2023 | GECCO | Pid-Inspired Modifications in Response Threshold Models In Swarm Intelligent Systems. | Maryam Kebari, Annie S. Wu, H. David Mathias |
| 2023 | ICMLA | A Genetic Algorithm for Combinational Logic Circuit Synthesis Using Directed Graph Primitives. | Richard C. Yarnell, Pierce Powell, Ronald F. DeMara, Annie S. Wu |
| 2022 | GECCO | Effects of imputation strategy on genetic algorithms and neural networks on a binary classification problem. | Esteban Segarra Martinez, Stephen V. Maldonado, Annie S. Wu, Ryan P. McMahan, Xinliang Liu, Blake Oakley |
| 2022 | VR | Research Trends in Virtual Reality Locomotion Techniques. | Esteban Segarra Martinez, Annie S. Wu, Ryan P. McMahan |
| 2021 | FlAIRS | Decentralized Swarm Desynchronization via Inter-agent Variation for Logistical Resupply. | Annie S. Wu, Joseph P. Giordano, H. David Mathias, Arjun Pherwani |
| 2021 | GECCO | Evolved response thresholds generalize across problem instances for a deterministic-response multiagent system. | H. David Mathias, Annie S. Wu, Daniel Dang |
| 2020 | FlAIRS | Character Depth and Sentence Diversification in Automated Narrative Generation. | Brooke Bottoni, Yasmine Moolenaar, Anthony Hevia, Thomas Anchor, Kyle A. Benko, Rainer Knauf, Klaus P. Jantke, Avelino J. Gonzalez, Annie S. Wu |
| 2020 | FlAIRS | Improving Multi-Agent System Coordination Via Intensity Variation. | H. David Mathias, Annie S. Wu, Laik Ruetten, Eric Coursin |
| 2020 | FlAIRS | Effects of Response Threshold Distribution on Dynamic Division of Labor in Decentralized Swarms. | Annie S. Wu, H. David Mathias, Joseph P. Giordano, Anthony Hevia |
| 2019 | FlAIRS | Improving File Compression Using Elementary Cellular Automata. | John Albury, Richard Wales, Annie S. Wu |
| 2018 | FlAIRS | Specialization versus Re-Specialization: Effects of Hebbian Learning in a Dynamic Environment. | Vera A. Kazakova, Annie S. Wu |
| 2018 | FlAIRS | Inter-Agent Variation Improves Dynamic Decentralized Task Allocation. | Annie S. Wu, Cortney Riggs |
| 2017 | FlAIRS | Effects of Task Consideration Order on Decentralized Task Allocation Using Time-Variant Response Thresholds. | Annie S. Wu, Vera A. Kazakova |
| 2017 | GECCO | Enhanced genetic path planning for autonomous flight. | Vincent R. Ragusa, H. David Mathias, Vera A. Kazakova, Annie S. Wu |
| 2017 | IROS | Iterative weighted 2D orientation averaging that minimizes arc-length between vectors. | Vera A. Kazakova, Annie S. Wu |
| 2016 | FlAIRS | Smarter Sharing Is Caring: Weighted Averaging in Decentralized Collective Transport with Obstacle Avoidance. | Vera A. Kazakova, Annie S. Wu |
| 2016 | FlAIRS | Building Redundancy in Multi-Agent Systems Using Probabilistic Selection. | Annie S. Wu, R. Paul Wiegand, Ramya Pradhan |
| 2013 | GECCO | Cluster energy optimizing genetic algorithm. | Vera A. Kazakova, Annie S. Wu, Talat S. Rahman |
| 2012 | IROS | Variation as an element in multi-agent control for target tracking. | Cortney Riggs, Annie S. Wu |
| 2009 | GECCO | On the performance effects of unbiased module encapsulation. | R. Paul Wiegand, Gautham Anil, Ivan I. Garibay, Ozlem O. Garibay, Annie S. Wu |
| 2008 | GECCO | Multi-agent task allocation: learning when to say no. | Adam Campbell, Annie S. Wu, Randall Shumaker |
| 2007 | GECCO | Learning and exploiting knowledge in multi-agent task allocation problems. | Adam Campbell, Annie S. Wu |
| 2007 | GECCO | Analyzing the effects of module encapsulation on search space bias. | Ozlem O. Garibay, Annie S. Wu |
| 2007 | IJCNN | Genetic Optimization of ART Neural Network Architectures. | Assem Kaylani, Ahmad A. Al-Daraiseh, Michael Georgiopoulos, Mansooreh Mollaghasemi, Georgios C. Anagnostopoulos, Annie S. Wu |
| 2006 | AAAI | Conflict Resolution and a Framework for Collaborative Interactive Evolution. | Sean R. Szumlanski, Annie S. Wu, Charles E. Hughes |
| 2006 | FlAIRS | GFAM: Evolving Fuzzy ARTMAP Neural Networks. | Ahmad A. Al-Daraiseh, Michael Georgiopoulos, Annie S. Wu, Georgios C. Anagnostopoulos, Mansooreh Mollaghasemi |
| 2006 | GECCO | Mating networks in steady state genetic algorithms are scale free. | M. Kivanc Oner, Ivan I. Garibay, Annie S. Wu |
| 2005 | CLUSTER | Topology-Based Meshes for Local Communication in Data-Parallel Applications. | Silvia Figueira, Stephen P. Beeby, Annie S. Wu |
| 2005 | GECCO | On favoring positive correlations between form and quality of candidate solutions via the emergence of genomic self-similarity. | Ivan I. Garibay, Annie S. Wu, Ozlem O. Garibay |
| 2005 | GECCO | On location independent representations and self-organization. | Ivan I. Garibay, Annie S. Wu, Ozlem O. Garibay |
| 2005 | GECCO | Behavior of finite population variable length genetic algorithms under random selection. | Hal Stringer, Annie S. Wu |
| 2005 | GECCO | Collaborative interactive evolution. | Sean R. Szumlanski, Annie S. Wu, Charles E. Hughes |
| 2005 | GECCO | Preservation of genetic redundancy in the existence of developmental error and fitness assignment error. | Ayse S. Yilmaz, Annie S. Wu |
| 2005 | ISPA | Identification, Expansion, and Disambiguation of Acronyms in Biomedical Texts. | David B. Bracewell, Scott Russell, Annie S. Wu |
| 2004 | GECCO | Effects of Module Encapsulation in Repetitively Modular Genotypes on the Search Space. | Ivan I. Garibay, Ozlem O. Garibay, Annie S. Wu |
| 2004 | GECCO | Winnowing Wheat from Chaff: The Chunking GA. | Hal Stringer, Annie S. Wu |
| 2004 | GECCO | Populating Genomes in a Dynamic Grid. | Han Yu, Ning Jiang, Annie S. Wu |
| 2004 | KES | Planning with Recursive Subgoals. | Han Yu, Dan C. Marinescu, Annie S. Wu, Howard Jay Siegel |
| 2003 | GECCO | A Genetic Algorithm as a Learning Method Based on Geometric Representations. | Gregory A. Holifield, Annie S. Wu |
| 2003 | GECCO | Evolving Sensor Suites for Enemy Radar Detection. | Ayse S. Yilmaz, Brian N. McQuay, Han Yu, Annie S. Wu, John C. Sciortino Jr. |
| 2003 | GECCO | Adaptation of Length in a Nonstationary Environment. | Han Yu, Annie S. Wu, Kuo-Chi Lin, Guy A. Schiavone |
| 2003 | ITiCSE | CRCD in machine learning at the University of Central Florida preliminary experiences. | Michael Georgiopoulos, Jos Castro, Annie S. Wu, Ronald F. DeMara, Erol Gelenbe, Avelino J. Gonzalez, Marcella K. Kysilka, Mansooreh Mollaghasemi |
| 2002 | GECCO | Population Genetics of Regulatory Genes: A Genetic Algorithm Model. | Gregory A. Holifield, Annie S. Wu |
| 2002 | GECCO | A Simple Method For Detecting Domino Convergence And Identifying Salient Genes Within A Genetic Algorithm. | Hal Stringer, Annie S. Wu |
| 2002 | GECCO | The Proportional Genetic Algorithm Representation. | Annie S. Wu, Ivan I. Garibay |
| 2002 | GECCO | Length Variation in Response to a Changing Environment. | Annie S. Wu, Han Yu, Kuo-Chi Lin, Guy A. Schiavone |
| 2002 | GECCO | The Effect of Diploidy on Integer Representations. | Ayse S. Yilmaz, Annie S. Wu |
| 2000 | GECCO | The Effects of Team Size on the Evolution of Distributed Micro air Vehicles. | Daniel J. Collins, Arvin Agah, Annie S. Wu, Alan C. Schultz |
| 1999 | CEC | An examination of building block dynamics in different representations. | Annie S. Wu, Kenneth A. De Jong |
| 1999 | CEC | Visual analysis of evolutionary algorithms. | Annie S. Wu, Kenneth A. De Jong, Donald S. Burke, John J. Grefenstette, Connie Loggia Ramsey |
| 1998 | PPSN | Genome Length as an Evolutionary Self-adaptation. | Connie Loggia Ramsey, Kenneth A. De Jong, John J. Grefenstette, Annie S. Wu, Donald S. Burke |
| 1996 | AAAI | Testing the Robustness of the Genetic Algorithm on the Floating Building Block Representation. | Robert K. Lindsay, Annie S. Wu |
| 1996 | PPSN | A Survey of Intron Research in Genetics. | Annie S. Wu, Robert K. Lindsay |
| 1994 | ICTAI | Studies on the Effect of Non-coding Segments on the Genetic Algorithm. | Annie S. Wu, Robert K. Lindsay, Michael D. Smith |